Gene Svir_18100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_18100 
Symbol 
ID8387137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1878414 
End bp1878794 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content67% 
IMG OID644975878 
Productketosteroid isomerase-like enzyme 
Protein accessionYP_003133660 
Protein GI257055828 
COG category[S] Function unknown 
COG ID[COG4319] Ketosteroid isomerase homolog 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.518339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGGGC ATGACAAGGT GGAGCGCGAA AAAGCGATGC GTCCCGAGGA CCTCACGCGC 
TTGTTCGTCG AACGGTCCAA CGCGGGCGAT GCGGCCGGGG TCGCGGCGCT GTACGAAGAG
GACGCGGTGC TGGCCTATCC ACCCGGCAAG CAGACGGTGG GCCGGGCGGC TATTCAGGCC
TTGTGGGAGA AGGTGCTGGC CGACCGGCCA CACTTCGAAC AGGAAACGCC GTTGCCGACC
CTGATCAGCG GTGACATCGC ACTCACCTCG ACCGAGCCGA AGGACGGGGT GGGGGCTCGG
GCGCAGGTGG TCCGCCGTCA GCCGGACGGA AGTTGGCTGC GCGTGCTCGA CCAGCCCGAA
TTCGTCTCCC GCGCCGAGTA A
 
Protein sequence
MSGHDKVERE KAMRPEDLTR LFVERSNAGD AAGVAALYEE DAVLAYPPGK QTVGRAAIQA 
LWEKVLADRP HFEQETPLPT LISGDIALTS TEPKDGVGAR AQVVRRQPDG SWLRVLDQPE
FVSRAE