Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_17460 |
Symbol | |
ID | 8387074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1807599 |
End bp | 1808738 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644975818 |
Product | predicted acyl-CoA transferase/carnitine dehydratase |
Protein accession | YP_003133600 |
Protein GI | 257055768 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTTGG AAGGCGTCGT GGTCGCCGAC TTCAGCCGAG TACTGGCGGG ACCGCTGGCC TCGATGACGC TGGCCGACCT CGGCGCGACC GTGATCAAAG TCGAACGCCC CGGCTCCGGC GACGACACCC GCAGCTGGGG ACCACCCTGG ACGAGTAACT CCAGCTCGTA CTTCGAATGC GCGAACCGAT CGAAACGGTC CGTGGTCCTC GACCTCGACG ACGAGGAGGA CCGGGCACTG GCACGTGAAC TCGCCCGGCG GGCAGACGTC CTGGTGGAGA ACTTCCGCGA GGGGGCGCTC GCCCGACGGG GACTCGACTA CGAGTCCGTG CGCGCCATCA ACGAGGGCAT CGTCTACTGC TCCATCAGCG GCTTCGGCCG CCGTGCGGGG GCGGCGATGG CCGGCTACGA CTTCCTCGTC CAGGCGATGG GTGGGCTCAT GAGCATCACC GGCACGGAGG ACGGGGAGCC GATGAAGGTC GGTGTGGCGT TGGTGGACGT CCTCACCGCC AAGGACGCCA CCATCGGCAT CCTCGCCGCG CTCCAGGCGC GGGCCGTGAC CGGGCGGGGA CAGTTGGTCG AGGTGAACCT GCTGTCCAGT CTGCTCGGTT CGCTCGCCAA CCAGGCCTCC GGCTACCTCG CCACAGGCCG GTCACCGCGC CGGATGGGCA ACCGACACCC CTCGATCGCG CCGTACGAGA CCCTGCGCTG CAAGGACGAC GTGATCGCGC TGGCCTGCGG GAACGACCGA CAGTTCCGCC TGCTCGCCGA GGTGGTGGGA GCGCCCGGTC TGGCGGACGA CCAGCGGTTC GCGACCAACG AGGCCCGGGT GCGCCACCGG GACGAGTTGC GGGCCGCGCT CGAGCAGCGG CTGCGACAGG ACACCGTCGA CTCCTGGAGC ACGAAGCTGA CCGACGTCGG AGTGCCCGCG GGCAAGGTCG GCGACATCGC CGACGGGATC CGACTGGCCG AATCGCTCGG CCTGGAACCC ACGGTGCCGG TCGGTGACTC GGCGCCACCC CAGATCAGAC ACCCCATCAG CTATTCGGAG ACACCGGTCG TCCACTACAC GGCACCACCA CGGCTGGGAC AACACGACGA CGAGATCCGC CGCTGGCTCA CGGAGGAGAG GACACGATGA
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Protein sequence | MPLEGVVVAD FSRVLAGPLA SMTLADLGAT VIKVERPGSG DDTRSWGPPW TSNSSSYFEC ANRSKRSVVL DLDDEEDRAL ARELARRADV LVENFREGAL ARRGLDYESV RAINEGIVYC SISGFGRRAG AAMAGYDFLV QAMGGLMSIT GTEDGEPMKV GVALVDVLTA KDATIGILAA LQARAVTGRG QLVEVNLLSS LLGSLANQAS GYLATGRSPR RMGNRHPSIA PYETLRCKDD VIALACGNDR QFRLLAEVVG APGLADDQRF ATNEARVRHR DELRAALEQR LRQDTVDSWS TKLTDVGVPA GKVGDIADGI RLAESLGLEP TVPVGDSAPP QIRHPISYSE TPVVHYTAPP RLGQHDDEIR RWLTEERTR
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