Gene Svir_17400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_17400 
Symbol 
ID8387068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1799700 
End bp1800275 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content68% 
IMG OID644975812 
Producthypothetical protein 
Protein accessionYP_003133594 
Protein GI257055762 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACATCG TGACATCCGA TCAACCGGTC TTCTCCCTCG ACAACCGCGC ACTGTTCGTG 
GTCGCCGGCC TCCCCGGAGC AGGGAAAAGC ACCCTGCTTC GCAACATCGT CGTCGACCCG
AAGGTCACTC TGCTGGACAC CGAGCAGATG CGTTCGAAGC TGGGCGCGCT CTTCCCCGCG
GGCACCCCCT ACTCCTACTA CCGACCTCTG GTGCACGTGT TGCACACGCT GCGACTCGTT
GCGACCGCCA TGCGCGCCCC CGGCCCGGTG GTGGTGCACG ATCCGGCCAC CGGCGCGCTC
ACCAGAACGG CGTTCGTCGT GCTCGGTGTC CTCACCGGTC GCAGTAGGCA TCTTTTGTGG
ATCGACTGCA CAGCACACGA AGCGCTGGCC GGCCAGCATC ACCGTGGTCG GGTCCTGCCC
CGCTGGTCGT TCGCCCGGCA CGTGCGCAAT GCGGCCCGGT TCCGCCGCCG CCTGCTCGCC
GCCGCCGTCC CCGCAGGCTG GCACAGCGTG ACCATGACCG ACCGTCACAC GGTTCGGCAC
GGCATGCGGA TCGTGCGCGC ACGCGACCGC CGATAG
 
Protein sequence
MHIVTSDQPV FSLDNRALFV VAGLPGAGKS TLLRNIVVDP KVTLLDTEQM RSKLGALFPA 
GTPYSYYRPL VHVLHTLRLV ATAMRAPGPV VVHDPATGAL TRTAFVVLGV LTGRSRHLLW
IDCTAHEALA GQHHRGRVLP RWSFARHVRN AARFRRRLLA AAVPAGWHSV TMTDRHTVRH
GMRIVRARDR R