Gene Svir_17040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_17040 
Symbol 
ID8387036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1754545 
End bp1754910 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content68% 
IMG OID644975780 
Producthypothetical protein 
Protein accessionYP_003133563 
Protein GI257055731 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.482925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCAGC ACATTTTTGT CTCCCTCGTG GATGACATCG ACGGCTCAGA AGCCGACGAG 
ACGGTGCAGT TTGCCCTCGA CGGTGTCACC TACGAGATCG ACCTGTCGGC GGAGAACGCC
GAGGAGCTGC GGGATGCGCT CGCCCCGTAC ATCGAGCACG CCCGCCGGGC GGGAGGCCGG
AAGCGCACGT CCAGCCGTCG CCGTCGCAAC GGGCAGGTCA CGACCCGTTC CTCCACCGCC
GAGCGGGAAC AGAACCAGGC CATCCGCGCC TGGGCCAGGG AGCAGGGGTA CGAGATCTCC
GACCGCGGCC GGATTCCCAC CGAGGTTGCG GAGGCTTACC GCAAGGCTCA CGGCAAGGCC
CGCTGA
 
Protein sequence
MAQHIFVSLV DDIDGSEADE TVQFALDGVT YEIDLSAENA EELRDALAPY IEHARRAGGR 
KRTSSRRRRN GQVTTRSSTA EREQNQAIRA WAREQGYEIS DRGRIPTEVA EAYRKAHGKA
R