Gene Svir_16880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16880 
Symbol 
ID8387020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1740598 
End bp1740783 
Gene Length186 bp 
Protein Length61 aa 
Translation table11 
GC content70% 
IMG OID644975764 
Producthypothetical protein 
Protein accessionYP_003133548 
Protein GI257055716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.301731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.232063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGGC CCAGTCCGAT CCAGATGCGG GAACACCTCT CCGGCGGGGA CCATCCGTGC 
GTCCGGAGCG AGCTCGTCCG ACACGCCCGT GGCCGGGGCG CGGGCGCCGA CGTGCTCCAG
CGTTTGGAGT CGATGCCCGA CCGTACCTGT GACGGTCGCA GCGCCGGCAG CGCGGAAATT
CTTTGA
 
Protein sequence
MSRPSPIQMR EHLSGGDHPC VRSELVRHAR GRGAGADVLQ RLESMPDRTC DGRSAGSAEI 
L