Gene Svir_16860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16860 
Symbol 
ID8387018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1739671 
End bp1739955 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content66% 
IMG OID644975762 
Productputative phospholipid-binding protein 
Protein accessionYP_003133546 
Protein GI257055714 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.817215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.322334 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGCA AGGGCCATGG TGAGGAACAC CGTTTCGAAG AGGCTCCGGA ATACCGCGCG 
GCCCGACTCC GCCGCGCGCT GGCGGAGGAT CCCCGAACGG CCGAACTGGG TCTGCAGGTC
GACGTGCGGG GAGAGCACGC TTATCTGAGC GGAACGGTGT CGTCCCAGGA ATACAAGGAC
CAGCTCGACA AGGTCCTGCA CGAGCAGGAG CCGCACCTTC GGGTGCACAA CGACGTCCGC
GTCGTCGAGG TGGCCGAACC GCCCGACTCC GAGGTGTTGC GATGA
 
Protein sequence
MQSKGHGEEH RFEEAPEYRA ARLRRALAED PRTAELGLQV DVRGEHAYLS GTVSSQEYKD 
QLDKVLHEQE PHLRVHNDVR VVEVAEPPDS EVLR