Gene Svir_16740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16740 
Symbol 
ID8387006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1727701 
End bp1728870 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content71% 
IMG OID644975750 
Productacyl-CoA dehydrogenase 
Protein accessionYP_003133534 
Protein GI257055702 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGAC CTGCCCCGGT GAGCACCCCC GACTTGCTGT ACTCCGATGT GGAAAGCGAT 
CTGCGCGCGA CGTTGCGGAA CGTGCTCTCC GACCACTGCG CGCCGTCCTC GCTCGTGGCC
CGGGCCGATG GCGACGAGCC CTATGACATG TCGCTGTGGC GGACATTGTC GGCCGAGTTG
GGGCTGGCGG GGTTACCGGT TCCGGAGCGA CTCGGCGGCC AGGGTGTGTC CTCCAGGGAG
ACCGCCCTCG TGCTGGAGGA GCTGGGACGT AGCGTGGCTC CCGTACCGTT TCTGGGCAGT
GCCGTGCTGA CGACGTCGGT GTTGCTGCGG GCCGACACCG CCGCCGAACA CGTGGCCGCG
CTGCTGCGAC GACTCGCGAC GGGTGAGGCG ACGGGGGCTC TCGCCGTTCC GTTGTCCACC
GCTCCGGAAG CGGCGTTCCC CACGACGGTA CGCGCCGTGG CCGGCCCCGA CGGTGTCGTC
CTCGACGGAA CGATCACCAC GGTCGCCGAC GCCTCGGTGG CCGACGTGCT CGTGGTCCCC
GCCGTCGGCC CCGACGGTCA AGGTCTGTAC GAAGTGGATA CCGGTCACTC CGGGGTGGAC
ATCACCGAGG TGGTGTCCTT CGACCTCACC CGCCGGGTCA GCGACGTGAC GATACGGCAG
GCCCCGGCGC GGCCGCTGGC CGAGGGACAG GAAGCGGTCA CCGCGCTGCG GCAGGGACTG
CTGATGGCGG CGGGCCTGCT CGCCTCCGAA CAGGTGGGGG TGACGCAGTG GTGCCTGGAC
ACCACGGTGG CGTACGTGCA GGAGCGCCAC CAGTTCGGCA GGCCCGTGGG CTCGTTCCAG
GCGCTCAAGC ACCGCCTCGC CGACGTGTGG CTCGAGCTGG TGGCGGCTCG TGCCGCCGCC
CGCTACGCCG CCGACGTACT CGCCGGACCG GATCCGTTCG GCTCGGACTC GGACGTCGAG
GTGGCCGTGG CCGTGGCGCA GTCCTACTGC GCGACCGTGG CCGTCCACGC CGCCGAGGAG
ACGATCCAAC TGCACGGTGG CATCGGCATG ACCTGGGAGC ATCCCGCACA CCTGTATCTC
AAGCGAGCCA AAGCCGACCA GCTCGCACTC GGCACACCGG GCCGGCACCG CGCGCGTCTC
GCCGAGGTGG TGGACCTTCC AGTGTCCTGA
 
Protein sequence
MEGPAPVSTP DLLYSDVESD LRATLRNVLS DHCAPSSLVA RADGDEPYDM SLWRTLSAEL 
GLAGLPVPER LGGQGVSSRE TALVLEELGR SVAPVPFLGS AVLTTSVLLR ADTAAEHVAA
LLRRLATGEA TGALAVPLST APEAAFPTTV RAVAGPDGVV LDGTITTVAD ASVADVLVVP
AVGPDGQGLY EVDTGHSGVD ITEVVSFDLT RRVSDVTIRQ APARPLAEGQ EAVTALRQGL
LMAAGLLASE QVGVTQWCLD TTVAYVQERH QFGRPVGSFQ ALKHRLADVW LELVAARAAA
RYAADVLAGP DPFGSDSDVE VAVAVAQSYC ATVAVHAAEE TIQLHGGIGM TWEHPAHLYL
KRAKADQLAL GTPGRHRARL AEVVDLPVS