Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_16740 |
Symbol | |
ID | 8387006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1727701 |
End bp | 1728870 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644975750 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_003133534 |
Protein GI | 257055702 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGGAC CTGCCCCGGT GAGCACCCCC GACTTGCTGT ACTCCGATGT GGAAAGCGAT CTGCGCGCGA CGTTGCGGAA CGTGCTCTCC GACCACTGCG CGCCGTCCTC GCTCGTGGCC CGGGCCGATG GCGACGAGCC CTATGACATG TCGCTGTGGC GGACATTGTC GGCCGAGTTG GGGCTGGCGG GGTTACCGGT TCCGGAGCGA CTCGGCGGCC AGGGTGTGTC CTCCAGGGAG ACCGCCCTCG TGCTGGAGGA GCTGGGACGT AGCGTGGCTC CCGTACCGTT TCTGGGCAGT GCCGTGCTGA CGACGTCGGT GTTGCTGCGG GCCGACACCG CCGCCGAACA CGTGGCCGCG CTGCTGCGAC GACTCGCGAC GGGTGAGGCG ACGGGGGCTC TCGCCGTTCC GTTGTCCACC GCTCCGGAAG CGGCGTTCCC CACGACGGTA CGCGCCGTGG CCGGCCCCGA CGGTGTCGTC CTCGACGGAA CGATCACCAC GGTCGCCGAC GCCTCGGTGG CCGACGTGCT CGTGGTCCCC GCCGTCGGCC CCGACGGTCA AGGTCTGTAC GAAGTGGATA CCGGTCACTC CGGGGTGGAC ATCACCGAGG TGGTGTCCTT CGACCTCACC CGCCGGGTCA GCGACGTGAC GATACGGCAG GCCCCGGCGC GGCCGCTGGC CGAGGGACAG GAAGCGGTCA CCGCGCTGCG GCAGGGACTG CTGATGGCGG CGGGCCTGCT CGCCTCCGAA CAGGTGGGGG TGACGCAGTG GTGCCTGGAC ACCACGGTGG CGTACGTGCA GGAGCGCCAC CAGTTCGGCA GGCCCGTGGG CTCGTTCCAG GCGCTCAAGC ACCGCCTCGC CGACGTGTGG CTCGAGCTGG TGGCGGCTCG TGCCGCCGCC CGCTACGCCG CCGACGTACT CGCCGGACCG GATCCGTTCG GCTCGGACTC GGACGTCGAG GTGGCCGTGG CCGTGGCGCA GTCCTACTGC GCGACCGTGG CCGTCCACGC CGCCGAGGAG ACGATCCAAC TGCACGGTGG CATCGGCATG ACCTGGGAGC ATCCCGCACA CCTGTATCTC AAGCGAGCCA AAGCCGACCA GCTCGCACTC GGCACACCGG GCCGGCACCG CGCGCGTCTC GCCGAGGTGG TGGACCTTCC AGTGTCCTGA
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Protein sequence | MEGPAPVSTP DLLYSDVESD LRATLRNVLS DHCAPSSLVA RADGDEPYDM SLWRTLSAEL GLAGLPVPER LGGQGVSSRE TALVLEELGR SVAPVPFLGS AVLTTSVLLR ADTAAEHVAA LLRRLATGEA TGALAVPLST APEAAFPTTV RAVAGPDGVV LDGTITTVAD ASVADVLVVP AVGPDGQGLY EVDTGHSGVD ITEVVSFDLT RRVSDVTIRQ APARPLAEGQ EAVTALRQGL LMAAGLLASE QVGVTQWCLD TTVAYVQERH QFGRPVGSFQ ALKHRLADVW LELVAARAAA RYAADVLAGP DPFGSDSDVE VAVAVAQSYC ATVAVHAAEE TIQLHGGIGM TWEHPAHLYL KRAKADQLAL GTPGRHRARL AEVVDLPVS
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