Gene Svir_16400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16400 
Symbol 
ID8386972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1687786 
End bp1688835 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content62% 
IMG OID644975716 
Productribonucleotide reductase, beta subunit 
Protein accessionYP_003133500 
Protein GI257055668 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0208] Ribonucleotide reductase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.876136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.394425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACCGGA ACCTCACCCT CGACTTCGGC GCCGCACGCG TGAACGTGGA CGACAAAGCC 
ATGATCAACG CGCGGGCCGA CGTCAACCAG CTACTGCCGA TGAAGTACGG CTGGGCGTGG
GAGAAGTACC TCGCGGGCTG TGACAACCAC TGGATGCCCA CGGAGGTCTC GATGCAGGCC
GACATCGCGC TGTGGAAGTC GCCCGACGGA CTCACCGACG ACGAACGGTT GATGCTCAAA
CGCAACCTCG GGTTCTTCGC GACCGCCGAG TCGTTGGTGG CCAACAACCT GGTCCTGGCC
GTGTACCGGC ACCTGACGAA CCCCGAGTGC CGCCAGTACC TGTTACGGCA GGCGTTCGAG
GAAGCCGTGC ACACCCACAC GTTCCAGTAC ATCTGCGTCA GTCTCGGCCT TGACGAGGGC
GAACTGTTCA ACGCCTACCG CGAGGTGCCG TCGATCGCGA ACAAGGACTC GTGGGCGTTG
CGGTACACCC GCAATCTGGA GGACCCCAAC TTCACCACCG GCACGATGGA GGCCGACCAG
GAGTTTTTGC GCGATCTCGT CGCGTTCTAC GTCGTGTTCG AAGGTATGTG GTTCTACACC
GGGTTCGCGC AGGTCCTGTC GTTGGGCAGG AGGAACAAGA TGGTGGGCAT CGCCGAGCAA
TATCAGTACA TCCTGCGCGA TGAGTCGATC CACTTGAACT TCGGCGTCGA CTGCATCAAC
CAGATCAAGG CCGAGAACCC ACACCTGTGG ACGCCGGAGT TCCAGCAGCA GGTGCGCGAC
ATGCTCGTCG AGGCGTGCGA GCTCGAAGTG GCCTACGCCC ACGACACCAT GCCACGCCCG
ATGCTGGGGT TGTCGGCGGA ACTGTGCGAA CAGTACATGC ACTTCATCAC CGACCGCAGA
GCCGCCCAGC TCGGCTTGGA CCCGGTGTTC GGAGAGCGGG AGAATCCGTT CCCATGGATG
TCGGAGGTCA TCGACCTGCG TAAGGAGAAG AACTTCTTCG AGACCCGTGT GACCGACTAT
CGCAGCGGTG CCGCGTTGGC TTGGGACTGA
 
Protein sequence
MNRNLTLDFG AARVNVDDKA MINARADVNQ LLPMKYGWAW EKYLAGCDNH WMPTEVSMQA 
DIALWKSPDG LTDDERLMLK RNLGFFATAE SLVANNLVLA VYRHLTNPEC RQYLLRQAFE
EAVHTHTFQY ICVSLGLDEG ELFNAYREVP SIANKDSWAL RYTRNLEDPN FTTGTMEADQ
EFLRDLVAFY VVFEGMWFYT GFAQVLSLGR RNKMVGIAEQ YQYILRDESI HLNFGVDCIN
QIKAENPHLW TPEFQQQVRD MLVEACELEV AYAHDTMPRP MLGLSAELCE QYMHFITDRR
AAQLGLDPVF GERENPFPWM SEVIDLRKEK NFFETRVTDY RSGAALAWD