| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_15590 |
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| Symbol | |
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| ID | 8386892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1599943 |
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| End bp | 1603278 |
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| Gene Length | 3336 bp |
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| Protein Length | 1111 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644975637 |
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| Product | carbamoyl-phosphate synthase large subunit |
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| Protein accession | YP_003133421 |
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| Protein GI | 257055589 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAC GCAGTGACAT CGAGCACGTA CTCGTGATCG GGTCGGGACC GATCGTCATC
GGCCAGGCCG CCGAATTCGA CTACTCCGGC ACCCAGGCGT GTCGCGTGCT CCGTTCCGAG
GGGCTGCGGG TGAGCTTGGT GAACTCCAAC CCGGCGACGA TCATGACCGA CCCCGAGTTC
GCCGACTCCA CCTACATCGA GCCGGTGACA CCGGATTTCG TGGAGAAGGT CATCGTCGCC
GAGCGGGAGC AGGGCAGGCC CATCGACTCC CTGCTGGCGA CCCTCGGCGG TCAGACGGCC
CTCAACTGCG CTGTGGCCCT GCACGAGCGC GGGGTGCTGG AGAAGTACGG CATCGAGCTC
ATCGGCGCCG ACATCGACGC CATCCAGCGG GGTGAGGACC GGCAGAAGTT CAAGGACATC
GTGCGGGCGG TCGGCGGTGG GGTGCCCCGC AGCGCCGTGT GCCACTCCAT GGAGGAGGTC
CGCGAGACCG TCGCCGAACT CGGTCTTCCC GTCGTGATCC GGCCCTCGTT CACCATGGGC
GGCCTCGGTT CCGGAATGGC CCACACTCCG GAGGAGCTCG AACGCATGGC GTCGATCGGA
CTGGAGGAGA GTCCGGTCAC CGAGGTGCTC ATCGAGGAGA GCGTGCTCGG GTGGAAGGAA
TACGAGCTGG AGCTCATGCG CGACCGCAAC GACAACGTGG TGGTCGTGTG CTCCATCGAG
AACATCGACC CGATGGGTGT GCACACCGGT GACTCGGTGA CCGTCGCACC CGCGATGACG
CTCACCGACC GTGAGTACCA ACACATGCGG GACGTCGGCA TCGCCGTGTT GCGCGAGGTC
GGCGTGGACA CCGGCGGGTG CAACATCCAG TTCGCCGTCA ACCCCGAGGA CGGCCGCATG
GTCGTCATCG AGATGAACCC CCGCGTGTCG CGGTCGTCGG CGTTGGCGTC GAAGGCGACC
GGGTTCCCGA TCGCCAAGAT CGCGGCGAAG CTGGCCATCG GCTACACGCT CGACGAGATC
ACCAACGACA TCACCGGTGA GACACCCGCG TCGTTCGAGC CGACGCTCGA CTACGTCGTC
GTGAAGATGC CGCGGTTCGC GTTCGAGAAG TTCCCCGGGG CGGACCCGGA GCTGACCACG
ACGATGAAGA GCGTCGGTGA GGCCATGGCG CTGGGGCGCA GCTTCCCCGA GGCGTTGGGC
AAGGCGATGC GGTCGATGGA GACCAAGGCG GGTGGTTTCT GGACCCGGCC CGACCCGGAG
GGCGCGACGC TGGAGTCGAC GCTGGAGGAG CTTCGCACCG CGCATGAGGG CCGGCTTTAC
GCCGTCGAAC GGGCGTTGCG GCTCGGCGCG ACGGTGGAGC AGGTGCACAA GGCCAGTGGC
ATCGATCCGT GGTTCATCGA CCAGATCGCG TTCATCGGTG AGGTCGGTGC CCAGGTGCGT
GACGCCCCCG TGCTGGAGGC GGACCTGCTG CGCAGGGCCA AGCGCGCCGG TCTGTCCGAC
CGGCAGATCG CCGCGCTTCG ACCGGAGCTG GCCGGTGAGG ACGGTGTTCG CACGCTACGG
CACCGGCTCG GGATCCGCCC GGTGTTCAAG ACCGTGGACA CCTGCGCGGC GGAGTTCGAG
GCGAAGACGC CGTATCACTA CTCGGCCTAC GAGGCCGACG CCACCGCCGA ATCGGAGGTG
GCCCCACAAC GTGAGAAGCC GAAGGTGTTG ATCCTCGGCT CGGGGCCGAA CCGGATCGGG
CAGGGGATCG AATTCGACTA CTCGTGCGTG CACGCCGCGC TCGCGTTGCG CGAGGCCGGG
TTCGAAGCCG TGATGGTGAA CTGCAACCCG GAGACGGTGT CCACCGACTA CGACACCTCC
GACCGGTTGT ACTTCGAGCC GTTGACCTTC GAGGACGTGC TCGAGATCGT GCACGCCGAG
CAGGCTTCGG GTGAGGTCGC CGGCGTGATC GTGCAACTGG GTGGGCAGAC GCCGCTCGGG
TTGGCGCAGC GGTTGGCCGA CGCCGGGGTT CCGGTGGTGG GTACTCCGCC CGAGGCGATC
CATCTGGCCG AGGAGCGCGG TGCCTTCGGT GAGGTGCTGG CGGCCGCCGG GCTGCCCGCG
CCGAAGTACG GTATGGCGAC GTCGTTCGAC GGCGCCCGGC GGATCGCCGA CGAGATCGGC
TATCCGGTGC TCGTGCGACC GTCCTACGTT CTGGGCGGCC GCGGTATGGA GATCGTCTAC
GACGAGGCGA CGCTACGCGG CTACATCGAG CGCGCCACGG AGGTCACACC CGAACACCCG
GTGCTGGTGG ACCGCTTCCT CGACGATGCG ATCGAGATCG ACGTCGACGC GCTCTACGAC
GGCGAGGAGT TGTACCTCGG CGGTGTGATG GAACACATCG AGGAGGCCGG GGTGCACTCC
GGTGACTCGG CGTGCGCGTT GCCTCCCATC ACGTTGGGGC GGACCGACCT CGAAGCGGTG
CGCCGTTCGA CCGAGGCCAT CGCCAAGGGC ATCGGCGTGC GGGGCCTGCT CAACGTGCAG
TACGCCCTCA AGGACGACAT GTTGTACGTG CTCGAGGCCA ACCCGAGGGC GTCGAGGACC
GTACCGTTCG TGTCGAAGGC CACGGCGGTG CCGCTGGCGA AGGCGGCGGC GCTGATCATG
ACTGGCTCGT CGATCGCCGA GCTGCGTGCT CGGGGCGTGC TCCCGGCCGA GGGGGACGGC
GGACTGCTGC CCCTGGGTTC CCCGGTGGCG GTCAAGGAAG CCGTGCTGCC GTTCAACCGC
TTCCGCACAC CGGAAGGCCA TGGGGTCGAC TCACTGCTCG GACCGGAGAT GAAGTCCACG
GGCGAGGTGA TGGGCGTCGA CCTGTCGTTC GGGGAGGCGT TCGCGAAGTC CCAGGCGGGT
GCGTACGGAT CTTTGCCGAC CCGCGGAACC GTGTTCGTCT CGGTGGCCAA CCGGGACAAA
CGTTCCTTGG TCTTCCCGGT GAAGCGACTG GCCGATCTCG GGTTCAAGGT GGTCGCCACC
GCGGGCACGG CGGACGTCCT GCGGCGCAAC GGCGTCGAGT GCTCGGTGGT GCGTAAGCAC
TACCAGGGCA GCACTCCCGA GGAACCCAAC ATCGTCGAGG TGATCCGGGA CGGCGGCGTG
GACATGGTGA TCAACACGCC GTACGGGAAC AGTGGACCGC GCGTGGACGG GTACGAGATC
CGCACGGCGG CGGTGTCGCG GGGGATTCCG TGCATCACGA CGGTGCAGGG AGCGGCGGCC
GCGGTACACG GCATCGAGGC GCTCATCCGA GGAGAGGTCA CCGTGCGGCC GTTGCAGGAA
CTCCAGGCGA GACTCCGTGA GGTGACGGAA GCGTGA
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| Protein sequence | MPKRSDIEHV LVIGSGPIVI GQAAEFDYSG TQACRVLRSE GLRVSLVNSN PATIMTDPEF
ADSTYIEPVT PDFVEKVIVA EREQGRPIDS LLATLGGQTA LNCAVALHER GVLEKYGIEL
IGADIDAIQR GEDRQKFKDI VRAVGGGVPR SAVCHSMEEV RETVAELGLP VVIRPSFTMG
GLGSGMAHTP EELERMASIG LEESPVTEVL IEESVLGWKE YELELMRDRN DNVVVVCSIE
NIDPMGVHTG DSVTVAPAMT LTDREYQHMR DVGIAVLREV GVDTGGCNIQ FAVNPEDGRM
VVIEMNPRVS RSSALASKAT GFPIAKIAAK LAIGYTLDEI TNDITGETPA SFEPTLDYVV
VKMPRFAFEK FPGADPELTT TMKSVGEAMA LGRSFPEALG KAMRSMETKA GGFWTRPDPE
GATLESTLEE LRTAHEGRLY AVERALRLGA TVEQVHKASG IDPWFIDQIA FIGEVGAQVR
DAPVLEADLL RRAKRAGLSD RQIAALRPEL AGEDGVRTLR HRLGIRPVFK TVDTCAAEFE
AKTPYHYSAY EADATAESEV APQREKPKVL ILGSGPNRIG QGIEFDYSCV HAALALREAG
FEAVMVNCNP ETVSTDYDTS DRLYFEPLTF EDVLEIVHAE QASGEVAGVI VQLGGQTPLG
LAQRLADAGV PVVGTPPEAI HLAEERGAFG EVLAAAGLPA PKYGMATSFD GARRIADEIG
YPVLVRPSYV LGGRGMEIVY DEATLRGYIE RATEVTPEHP VLVDRFLDDA IEIDVDALYD
GEELYLGGVM EHIEEAGVHS GDSACALPPI TLGRTDLEAV RRSTEAIAKG IGVRGLLNVQ
YALKDDMLYV LEANPRASRT VPFVSKATAV PLAKAAALIM TGSSIAELRA RGVLPAEGDG
GLLPLGSPVA VKEAVLPFNR FRTPEGHGVD SLLGPEMKST GEVMGVDLSF GEAFAKSQAG
AYGSLPTRGT VFVSVANRDK RSLVFPVKRL ADLGFKVVAT AGTADVLRRN GVECSVVRKH
YQGSTPEEPN IVEVIRDGGV DMVINTPYGN SGPRVDGYEI RTAAVSRGIP CITTVQGAAA
AVHGIEALIR GEVTVRPLQE LQARLREVTE A
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