Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_14460 |
Symbol | |
ID | 8386779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1492547 |
End bp | 1493494 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644975525 |
Product | RNA polymerase sigma factor, sigma-70 family |
Protein accession | YP_003133313 |
Protein GI | 257055481 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGTTCCC AACGCGACCG TCCGGTAAGC GAAGAACCCG ACATCGTGCG CTACTACCTT GACGAAGTCG GCGAGACCCC TCTGCTGACC GCCAACCAGG AGGTGGAGCT CGCCAAGCGC ATCGAGGCCG GAGTCTACGC GGCCGAATTG CTCCGCCGTG CCGACGAGGG CGAGATCACC CTCGACTACG ACCGTCGGGA CCTGGAGATC GTCGCTCGCG ACGGGCAGCG CGCCAAGGAT CACATGATCC GGGCCAACCT CCGTCTCGTG GTGACGGCGG CGCGGAAGAA CCGCCACACG AACCTGCCGC TGCTGGACGC GATCCAGGAG GGCAACCTCG GACTGATCCG GGCCGTGGAG AAGTTCGACT ACGCCAAGGG CTTCAAGTTC TCTACCTATG CTATGTGGTG GATCCGGCAG GCGATCCAGC GCGGCAACGC GTTCCAGAGC AACGCCATCC GGCTGCCGAT GCACGTCAGC GAGCAGGTGG CCAAACTGGA CCGGCTGGAA CGCACACTGC AGTCGCGCAG TAACCACGAG CTCACGGTGG AGGAACTGGC CGCCGCGGCC GAGATGCCCG TGGAGCGGGT CGAAGCGCTG CGCCAGGCCG GTCGATCCAC CGTCAGCCTG GACATGTCCC TCGACGAGGA CGGCGAGCTG TACCTGCGCG ACCTCGTGGC CGACGGGACC GTGCCCGCTG TCGGCGAGGG CATCGAGCGG CAGGCCATGG TCGACCAGGT GCGGGCCACG ATCGACAGTC TTCCGCCCAT GGAGGCGGCG GTGGTGTCGC TGCGGTACGG CCTGCGGGAC GGTCACCAGC ACACGATCCC GGAGATCTCG CAGCGTCTCG GCCTGAGCCG CAAGCGGGTG CGCACACTCG AACAGCGCGC CATGGCCATG CTGCGGGAGC CGCAGCGCAG TGAACCTCTG TTGGACTGGG CGAGCTGA
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Protein sequence | MGSQRDRPVS EEPDIVRYYL DEVGETPLLT ANQEVELAKR IEAGVYAAEL LRRADEGEIT LDYDRRDLEI VARDGQRAKD HMIRANLRLV VTAARKNRHT NLPLLDAIQE GNLGLIRAVE KFDYAKGFKF STYAMWWIRQ AIQRGNAFQS NAIRLPMHVS EQVAKLDRLE RTLQSRSNHE LTVEELAAAA EMPVERVEAL RQAGRSTVSL DMSLDEDGEL YLRDLVADGT VPAVGEGIER QAMVDQVRAT IDSLPPMEAA VVSLRYGLRD GHQHTIPEIS QRLGLSRKRV RTLEQRAMAM LREPQRSEPL LDWAS
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