Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_14440 |
Symbol | |
ID | 8386777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1490529 |
End bp | 1491572 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644975523 |
Product | DNA-binding domain-containing protein, AraC-type |
Protein accession | YP_003133311 |
Protein GI | 257055479 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.383418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATC GGGAACACCG GGGCACCACA TCCTCCGAGT CGGACAAATC AGGCGCCGCG GCAGCGACCC CGGCGACGCT GTTGGAAATG CGCCACCTCA CGTCGGACCC ACACCTCCAG CAGCGGGACC TCCCGCTCGA CTCGATGCGG ATGTGGGCGA TGTCGTTCGC GCCCATGATG TTCCACCGCA CACCCGAACA GATCGAGCAA TCCGATCCGG ATACGTACAA CCTCGTGCTG CTGCGCGCGG GGACGATGCG CCGCGTCGAC GCCACGAGCG AGATGACCTA CGGACCCGGC GATATGCACG TCAACGACTC GTCACTGCCG TTCCAGCTCG AAGCTCACGG TTGCCATATG GTCTCCTGCA TCGGCGTCGA GGTGCCAAAG AGGCTGCTGC CGTTGCCGAA TGACCGCGTG GCAGCACTGG TCGGGCGCAA GCTGTCGGCG CGGGAGGGCA TGGGGGGCCT GTTGGCGACC GTGCTCGATC ACCTCATCAC CGGCCACGGC TCCTATCGAA GCACGGACGC ACCACGACTG GCGGTGGTGC TCCGGGAGAC ACTCGCGGGC CTGTTCGCGC GCACGCTGCA GGACGAGGAA CAGTACGTCC CCACGGCGGC GTATCGCCGG GACCTCCTGC TTCGGATGCG GATGTTCATC GACCAACACC TGTCCGACCC CGAGCTCGGT CCCCGCCTGA TCGCCGCGGC CCACAACGTC TCGATCAGCT ACGTCCACCG ACTGTTCGGC GACGACGGGA CCACGGTGGC GGGCTGGATC CGGGCGCGGA GACTGGAGCG GGCCCGGAGG GATCTCTGCG ACCCGGCGAT GCGCATCGTA CCCGTCCACC ACATCGCGGC ACGCTGGGGT TTCTCCCACC ACGCGGCTTT CACCCGCGCC TTCCGAACCG CCTACGGGAT CGCTCCCCGC GATTTTCGGC GCGCAGCACT ACCCCAAACG AAGTGGAGGG AACGTCAAAA GATCGAAGAC GCTGTGCCAA CGACATCCCC CGTGGTCCAC ACCAACATGG TGTCTCGACA GTGA
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Protein sequence | MTDREHRGTT SSESDKSGAA AATPATLLEM RHLTSDPHLQ QRDLPLDSMR MWAMSFAPMM FHRTPEQIEQ SDPDTYNLVL LRAGTMRRVD ATSEMTYGPG DMHVNDSSLP FQLEAHGCHM VSCIGVEVPK RLLPLPNDRV AALVGRKLSA REGMGGLLAT VLDHLITGHG SYRSTDAPRL AVVLRETLAG LFARTLQDEE QYVPTAAYRR DLLLRMRMFI DQHLSDPELG PRLIAAAHNV SISYVHRLFG DDGTTVAGWI RARRLERARR DLCDPAMRIV PVHHIAARWG FSHHAAFTRA FRTAYGIAPR DFRRAALPQT KWRERQKIED AVPTTSPVVH TNMVSRQ
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