Gene Svir_14040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_14040 
Symbol 
ID8386737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1445312 
End bp1445836 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content66% 
IMG OID644975485 
Producthypothetical protein 
Protein accessionYP_003133273 
Protein GI257055441 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.593323 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGCC AGGACCCCAT CAAGGCCGGT GAGCAACTGC AGCGATTCGC GGAGAACCTG 
CAACAGAAGG CACAGCGCTA TTCCGCGCTA CACCAGCGCC TCGGCTCGGT CGGCGTCACG
GAGCGCTCGG CGGGTGGTGA GGTGACGGTC ACCGTCGACG CGAACGGCGT GTTGACCGAT
CTGGAGCTGT CGGAGCGGAC AAAAGGGATG GACCCGGCCA TGGTGTCCGC CACGATCATG
AGTTGTCTGC GGCAGGCGCA GGCCAAGCTG CGTGAGCAGG TGGCCACCCT CGTGCACGAG
ACGGTCGGCG ACGACCCCGC CGGTAACAAC ATCGTCAACC AGTACGCCGA ACGCTTCCCC
GACCCGGTCG ACGAGGACGG GGACGATCCG TCCCTGCGCG AATTGTCGAT CGGTCGACTC
GAAGACGAAT CGGCTGAACG GAAACCGGAA CCGCGACGGC CTCGGCCACG TCCACTCGAG
GACGAAGACG ACGATCTGGG TGGCGGGTCC ATCCTGCGGC GTTAG
 
Protein sequence
MLGQDPIKAG EQLQRFAENL QQKAQRYSAL HQRLGSVGVT ERSAGGEVTV TVDANGVLTD 
LELSERTKGM DPAMVSATIM SCLRQAQAKL REQVATLVHE TVGDDPAGNN IVNQYAERFP
DPVDEDGDDP SLRELSIGRL EDESAERKPE PRRPRPRPLE DEDDDLGGGS ILRR