| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_13970 |
|---|
| Symbol | |
|---|
| ID | 8386730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1440140 |
|---|
| End bp | 1440775 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644975478 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003133267 |
|---|
| Protein GI | 257055435 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5502] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.607556 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACA CCGGCGATCC ACTCGCCCGA GCACAGAACA CCGCCCACGA ATGGCTGACC
ACGGTCGCCT CGGCGCTGGG CACCGACGAC CGCCGCTACA CCTACCGGGT GGTGCGGGCC
TGGCTGCACA CGTTCCGCGA CCGGCTCACC GTGGAATCGG CCGCCCACTT CGCGGCACAG
CTGCCCGAAT TGTTGCGCGG CATGTTCTAC GACGGCTGGG TGCCGAGCAA GGTGCCCCTG
CGTTACAGCG CCGACGAGTA CATCGATCGC ATCTCCGAGT CGGCCACCAT CCGCCGCACC
GACGTGCGAT CCGCTATGCG GCGGGTGTCC GAGGGGATGC AGAGGTTGCT GTCCCCCGGC
TCACTCGAAC GTGCGCTGGA GCATCTCCCG CGTGACCTGC AGGAGGTGTT CCTGCCCGCC
ACCCAACGAG CGGCCGCGCA CAACGGAATG GGAACGAGCG ACGACACCAC CGAACTGTGG
GAACTGCGCC GCAAGGTCGA GTACCTGGTC GACGCGGTGT CGGACCTCAA CAGGCAGCTG
ATGGACCGCC CGTTCTCCGG CGCCCGTACC GACCGCGACC CGGAGGCCGT CACCGCCGCC
GAGGACATGT TGCTCCCCCA ACAGGGGATC TCCTGA
|
|---|
| Protein sequence | MTNTGDPLAR AQNTAHEWLT TVASALGTDD RRYTYRVVRA WLHTFRDRLT VESAAHFAAQ
LPELLRGMFY DGWVPSKVPL RYSADEYIDR ISESATIRRT DVRSAMRRVS EGMQRLLSPG
SLERALEHLP RDLQEVFLPA TQRAAAHNGM GTSDDTTELW ELRRKVEYLV DAVSDLNRQL
MDRPFSGART DRDPEAVTAA EDMLLPQQGI S
|
|---|
| |