Gene Svir_13720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_13720 
Symbol 
ID8386708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1412610 
End bp1413242 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content68% 
IMG OID644975456 
Producthypothetical protein 
Protein accessionYP_003133246 
Protein GI257055414 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.195466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCGG CGGGGAGGAA GTGGCTGCCG CGCGTTGTTG TCGGGCTCGT TCTCGTAGGG 
CTACTGCTCG TCGGGGGCAC CGCGTTCCGG GTGTGGTACG TGGCGCGGGC CGACGAGCGT
CCCCGAGTGG ACGCCATCGT GGTGCTGGGG GCCGCGCAGT ACAACGGCAG GCCGTCGGAG
ATCTTCCAGG CGCGGCTCGA CCACGCTCGT CAGCTCTACG AGGAAGGTGT CGCTGACGTC
ATCGTCACGA CCGGGGGCAT GCGGGACGGC GACGCTTACA CTGAGGCCGA GGCCGGTGCG
AACTGGTTGG TGAGCCAAGG AGTGCCGGTG GAGGCGACGT TGCCCGTGGG TGAGGGCAGT
GACACGTTGC GCTCCTTGCG CGCGGCGGCG GTGGTGCTCC GGGAACGCGA CTGGAACGAC
GTCGTGCTCG TGAGTGACCC GTGGCATTCG CTACGGGCGA AGATCATGGC GGAGGACGCC
GGGCTTTCGG TGTGGACTTC GCCCACCCAT TCCGGGCCGA TCGTGCAGAC GCGTTCCACC
CAAGCGCGGT ACATCCTGCG GGAGACCGCC GCGTTGCTGT ACTACCGCTT GTCGAAAGAC
CCGGCGGATC AGGTGAACGA TCTGGGGATG TAG
 
Protein sequence
MAAAGRKWLP RVVVGLVLVG LLLVGGTAFR VWYVARADER PRVDAIVVLG AAQYNGRPSE 
IFQARLDHAR QLYEEGVADV IVTTGGMRDG DAYTEAEAGA NWLVSQGVPV EATLPVGEGS
DTLRSLRAAA VVLRERDWND VVLVSDPWHS LRAKIMAEDA GLSVWTSPTH SGPIVQTRST
QARYILRETA ALLYYRLSKD PADQVNDLGM