Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_13720 |
Symbol | |
ID | 8386708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1412610 |
End bp | 1413242 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644975456 |
Product | hypothetical protein |
Protein accession | YP_003133246 |
Protein GI | 257055414 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.195466 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCCGCGG CGGGGAGGAA GTGGCTGCCG CGCGTTGTTG TCGGGCTCGT TCTCGTAGGG CTACTGCTCG TCGGGGGCAC CGCGTTCCGG GTGTGGTACG TGGCGCGGGC CGACGAGCGT CCCCGAGTGG ACGCCATCGT GGTGCTGGGG GCCGCGCAGT ACAACGGCAG GCCGTCGGAG ATCTTCCAGG CGCGGCTCGA CCACGCTCGT CAGCTCTACG AGGAAGGTGT CGCTGACGTC ATCGTCACGA CCGGGGGCAT GCGGGACGGC GACGCTTACA CTGAGGCCGA GGCCGGTGCG AACTGGTTGG TGAGCCAAGG AGTGCCGGTG GAGGCGACGT TGCCCGTGGG TGAGGGCAGT GACACGTTGC GCTCCTTGCG CGCGGCGGCG GTGGTGCTCC GGGAACGCGA CTGGAACGAC GTCGTGCTCG TGAGTGACCC GTGGCATTCG CTACGGGCGA AGATCATGGC GGAGGACGCC GGGCTTTCGG TGTGGACTTC GCCCACCCAT TCCGGGCCGA TCGTGCAGAC GCGTTCCACC CAAGCGCGGT ACATCCTGCG GGAGACCGCC GCGTTGCTGT ACTACCGCTT GTCGAAAGAC CCGGCGGATC AGGTGAACGA TCTGGGGATG TAG
|
Protein sequence | MAAAGRKWLP RVVVGLVLVG LLLVGGTAFR VWYVARADER PRVDAIVVLG AAQYNGRPSE IFQARLDHAR QLYEEGVADV IVTTGGMRDG DAYTEAEAGA NWLVSQGVPV EATLPVGEGS DTLRSLRAAA VVLRERDWND VVLVSDPWHS LRAKIMAEDA GLSVWTSPTH SGPIVQTRST QARYILRETA ALLYYRLSKD PADQVNDLGM
|
| |