Gene Svir_13110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_13110 
Symbol 
ID8386647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1347576 
End bp1348121 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content66% 
IMG OID644975395 
Productaerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein 
Protein accessionYP_003133185 
Protein GI257055353 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.733085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCA CCGTCACCGT TGACGGAACC CGCTACACCG ACGACGTCGA GCCGCGCACA 
CTGCTCGTGC ACTACCTGCG TGATCAGCTC GGCAAGGTCG GCACCGTGGT GGGATGCGAC
ACCAGTAACT GCGGTGCCTG CACCGTGCAC CTCAACGGGC AGAGCGTGAA GTCCTGCTCG
GTGCTCGCGG TCCAGGCCGA CAGTGCCGAG ATCACCACGA TCGAAGGGCT CGCGCGTGAC
GGCGAGCTGC ATCCGGTGCA GAAGGCTTTC GAGGACAACC ACGCATTGCA GTGCGGCTTC
TGCACACCCG GAATGATCAT GCAGTCGCTC GACCTGTTGT CGGAGAACCC CGATCCGGAT
GAGCAGGCCG TTCGTGAGGG ACTGGAGGGC AACCTCTGCC GCTGCACCGG ATATCAGAAC
ATCGTCCGCG CGGTGCGGGA CGCGGCCGAA CGCATGCGCC CCGGAGCGCA GCCGGAGATC
GAACGCGCTG GTGAGACCAC GGGAACCGCG ACGACGCCGG GCATGGGCGG AGGTGTTCAG
GCATGA
 
Protein sequence
MRITVTVDGT RYTDDVEPRT LLVHYLRDQL GKVGTVVGCD TSNCGACTVH LNGQSVKSCS 
VLAVQADSAE ITTIEGLARD GELHPVQKAF EDNHALQCGF CTPGMIMQSL DLLSENPDPD
EQAVREGLEG NLCRCTGYQN IVRAVRDAAE RMRPGAQPEI ERAGETTGTA TTPGMGGGVQ
A