Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_12420 |
Symbol | |
ID | 8386579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1281343 |
End bp | 1281732 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644975328 |
Product | hypothetical protein |
Protein accession | YP_003133118 |
Protein GI | 257055286 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.26878 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGAATCGT CGATCCAGCT TGGTCAGCGA CTGGTAGGGG TAGGAACCGG ACCGACGATC GAACTCGTCA TCCCCTTGGC ACTGGTGGCT GTCGTCATGG GCTTTCTGGG AATTCTGGGC AGGAAAGGAA AGATCAAGCC CAACGGAGCT TTCGGTATCC GCACCACCCG GACGATGAAC GACTCGTCTG AGTGGTACCG CGTTCATCGC GAAGCCGCGC CTTGGTCCTT GGCGGCGCAG CAGCGTCCGT GGGCGGGATG TCGCCGTCTT ACTCGTACCC GAGGCACTCC GCAGATCGTG GCCGTTCTGG TGACGATGGC GACGATGGCG GCCCTGCTCA CCGTTGGCAC GGTGTCGGCC TCCCGCCGCG GCGGTTCGGA CCAGAATTGA
|
Protein sequence | MESSIQLGQR LVGVGTGPTI ELVIPLALVA VVMGFLGILG RKGKIKPNGA FGIRTTRTMN DSSEWYRVHR EAAPWSLAAQ QRPWAGCRRL TRTRGTPQIV AVLVTMATMA ALLTVGTVSA SRRGGSDQN
|
| |