Gene Svir_12420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_12420 
Symbol 
ID8386579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1281343 
End bp1281732 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content63% 
IMG OID644975328 
Producthypothetical protein 
Protein accessionYP_003133118 
Protein GI257055286 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.26878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAATCGT CGATCCAGCT TGGTCAGCGA CTGGTAGGGG TAGGAACCGG ACCGACGATC 
GAACTCGTCA TCCCCTTGGC ACTGGTGGCT GTCGTCATGG GCTTTCTGGG AATTCTGGGC
AGGAAAGGAA AGATCAAGCC CAACGGAGCT TTCGGTATCC GCACCACCCG GACGATGAAC
GACTCGTCTG AGTGGTACCG CGTTCATCGC GAAGCCGCGC CTTGGTCCTT GGCGGCGCAG
CAGCGTCCGT GGGCGGGATG TCGCCGTCTT ACTCGTACCC GAGGCACTCC GCAGATCGTG
GCCGTTCTGG TGACGATGGC GACGATGGCG GCCCTGCTCA CCGTTGGCAC GGTGTCGGCC
TCCCGCCGCG GCGGTTCGGA CCAGAATTGA
 
Protein sequence
MESSIQLGQR LVGVGTGPTI ELVIPLALVA VVMGFLGILG RKGKIKPNGA FGIRTTRTMN 
DSSEWYRVHR EAAPWSLAAQ QRPWAGCRRL TRTRGTPQIV AVLVTMATMA ALLTVGTVSA
SRRGGSDQN