Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_12330 |
Symbol | |
ID | 8386570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1271014 |
End bp | 1271880 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644975319 |
Product | sugar phosphate isomerase/epimerase |
Protein accession | YP_003133109 |
Protein GI | 257055277 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.205248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.361397 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACTG TGCATCAGGT CGGTGTGAAC ACGTGGGTCT GGACATCACC GCTGGATGAC GCCTGGCTGC GGAAGCTGGT GCCGATCATC GCGGCCCGGG GTTTCGACGT CGTCGAACTC CCGGTGGAGA ACCCGGGGGA CTGGGACCCC CGTGAGGCGA AGCGGCTGCT GGTCGAACAC GATCTCGGGG CGTCGGTGGT GTTGGTCATG CCGCCGGGGC GGGAATTGGT GGACACCGAT GCCGCCACGG TCAGCGCCAC CCAGGACTAC CTACGGCATT GCCTGGACAT CGCGGCGGAA CTCGGTTCCC CCACGTTGTG CGGTCCGGCC TACGCCTCCG TGGGGCGGAC GTGGCGGATG ACGGAACGGC AGCGAGCCGC GTGCGTCCGT GAATGGCGGG ATCACATCAC CCCGGTGCTG GAACACGCCC GGGACGTCGG CGTGACACTC GGGGTCGAAC CGCTCAACCG GTACGAGACC AGCCTGTTCA ACACCGTCGA ACAGACTCTG CGGGCCCTGG ACGGACTGCC TTCCTGCGGT GTCGCGCTCG ACCTCTACCA CCAGAACATC GAGGAGCGCG ACATCGCCGC GGCGATCCGC GCGGCCCGCA GCCGCGTCGC GCACGTGCAG GTGTGCGCCA ACGACCGGGG CACACCCGGT CGTGACCACT TCGACTGGCC CGAATTGCTG TCCGCGATCG CCGATGCCGG TTACACCGGT CCGTTGTGCA TCGAGTCGTT CACCGCGCAC AACAGCAGCA TCGCCACGGC GGCCTCGATC TGGCGTCCGC TGGCCACGAG TCAGGACGCA CTCGCGGTCG ACGGACTGGC CTTCCTGAAG GAGGTGATGG CGGAGGTTCA TTACTGA
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Protein sequence | MSTVHQVGVN TWVWTSPLDD AWLRKLVPII AARGFDVVEL PVENPGDWDP REAKRLLVEH DLGASVVLVM PPGRELVDTD AATVSATQDY LRHCLDIAAE LGSPTLCGPA YASVGRTWRM TERQRAACVR EWRDHITPVL EHARDVGVTL GVEPLNRYET SLFNTVEQTL RALDGLPSCG VALDLYHQNI EERDIAAAIR AARSRVAHVQ VCANDRGTPG RDHFDWPELL SAIADAGYTG PLCIESFTAH NSSIATAASI WRPLATSQDA LAVDGLAFLK EVMAEVHY
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