| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_12320 |
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| Symbol | |
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| ID | 8386569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1269814 |
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| End bp | 1270989 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644975318 |
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| Product | monosaccharide-binding protein |
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| Protein accession | YP_003133108 |
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| Protein GI | 257055276 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.167989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.737687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAAAT CGTGGTTGAC CGTCGTCGCC GCGGTGGGGG CGTTGACGCT GGCGAGCTGC
ACCAGTGATC TACCCGCCGA GAGCGGTTCG TCGGGGGACG CGCGGCAGCA ACCCTCCGAG
CAGAACGAAT TCTTCGATCA AACCGAGTAC GAACGGCAAC TCGCGCTCCG TACGGCCACC
CCCGAGGGGC CGGACGACAA ACCGTGGGAG CAGGCGCTCG AACCGGACCT GGTCGACACC
TCCTCCTACG CCAAGTCCGG GCCGTACCAC CTGTGCTTCT CCAACGCCTC GGTGGACAAC
CCGTGGCGAC AGGTCGGCTG GAAGACCATG CAGGCCGAGG TGGAGTTGCA CGATGAGATC
GCCGAGTTCA CCGTTCTCGA CGCCGAGGCC AAGGACGACA AGCAGATCAG TGACATCGCG
TCGTTGCTGT CCCGGGGTTG TGACGCGCTG ATCGTCTCGC CGAACACCAC GGCGACGTTG
ACGCCCGCCG TGGAGCAGGC GTGTGACAGC GGGATCCCGG TGATCGTCTT CGACCGTGGT
GTCAACACCG ACTGTCCCGT GACGTTCATT CACCCCATCG GGGGGTATGC CTTCGGAGCC
ACGGCCGCGG AATTCCTCGC CGACGAAGTC GGGGAGGGGG GAACGGTGCT GGCCCTGCGG
GTGCTCCCCG GAGTCGACGT GCTGGAGCAC CGTTGGGCCG CGGCCGAACG CATCTTCGCC
GAACGCGGCG TCGAGGTGGT GGGGGTCGAG TTCACCGAGA ACGACACCGC GGGTGCCAAG
AGCATCGTCA GTGACTACCT CCAGCGCGAA GGCCGGATCG ACGGCATCTG GATGGACGAC
GGCACGGCCG CCGTGGCCGT GCTGGAGGCG TTCGAGGATC AAGGCATGGA ACCGCCCGCC
ATCTCGGGCG AGGACCAGCA GCAGTTCTTG GAGAAGTGGA GCAAGGAGAA CCTGACCGCG
CAGGCACCGT CCTATCCGAC CTACCAGTGG CGTACACCCG TGATCGCCGC GTTGCGGGTC
CTGTCGGGTG AACAAGTACC ACACGAATGG ATCCTGCCCC AGCCGGTGGT GACGGCAGAG
AATCTCGACC AGTACCTCGT CGAAGGCATG CCGCCGTTGC ACTACGCGCT GTGCGGCTGC
CAGGACATGC CCGACTACCC CCAACGCTGG CAATGA
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| Protein sequence | MRKSWLTVVA AVGALTLASC TSDLPAESGS SGDARQQPSE QNEFFDQTEY ERQLALRTAT
PEGPDDKPWE QALEPDLVDT SSYAKSGPYH LCFSNASVDN PWRQVGWKTM QAEVELHDEI
AEFTVLDAEA KDDKQISDIA SLLSRGCDAL IVSPNTTATL TPAVEQACDS GIPVIVFDRG
VNTDCPVTFI HPIGGYAFGA TAAEFLADEV GEGGTVLALR VLPGVDVLEH RWAAAERIFA
ERGVEVVGVE FTENDTAGAK SIVSDYLQRE GRIDGIWMDD GTAAVAVLEA FEDQGMEPPA
ISGEDQQQFL EKWSKENLTA QAPSYPTYQW RTPVIAALRV LSGEQVPHEW ILPQPVVTAE
NLDQYLVEGM PPLHYALCGC QDMPDYPQRW Q
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