Gene Svir_12000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_12000 
Symbol 
ID8386537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1238518 
End bp1238955 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content63% 
IMG OID644975289 
Producthypothetical protein 
Protein accessionYP_003133079 
Protein GI257055247 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.87857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCTG AACGCTACGT ATGGGCGAAG TACTTTTGGG AACAAGCACG CGACGCCAAC 
GGCGTGGCAC GCAGACACCT CGGTGACACC ACCCGCAACA ACGGTGCGCC CACGGTCGGA
AGTCCGTTCG TCGCACTATG CGGAATCGAC GTCACCCCGC ACCCCGAGGA CACGGACACA
GCCCGGGGCA CGTGCTTCGC GCCAGCATGC ATGGTGTGCA CCACCCTGTT CGCCCGCGCA
ACAGGATGGT CGGCCGGAGC GATCGGAAAC CTCATCCAAA CGTTCCAGTG GACCAACAAC
GACGTCCGAC AACTGGGCCT TGCGCTGGGC ATGACCGCCT CGCAAACCCG CCGCCAAATC
GAACAGTGGA CACAGGAAGC CGACAAAGTG AACAAGGCCC GACACACCGC CAAACAGCAG
AAGGCGGCGG GAAGATGA
 
Protein sequence
MQPERYVWAK YFWEQARDAN GVARRHLGDT TRNNGAPTVG SPFVALCGID VTPHPEDTDT 
ARGTCFAPAC MVCTTLFARA TGWSAGAIGN LIQTFQWTNN DVRQLGLALG MTASQTRRQI
EQWTQEADKV NKARHTAKQQ KAAGR