| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_11820 |
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| Symbol | |
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| ID | 8386519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1223791 |
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| End bp | 1224801 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644975271 |
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| Product | small-conductance mechanosensitive channel |
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| Protein accession | YP_003133063 |
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| Protein GI | 257055231 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.139296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACAGT TCCTCAGCGA ACCCTCCGGG AGCGAACCAC CCGAATGCGC CCAGGACATC
GGATCGTGGT GTCAACAGGT CTGGGAGATC ACGGGTAACC CGTGGCTTGC GGCGTCGGCC
GACTGGCTCA TAGCACGGCC GCTCCGAATC CTGCTGATCC TCCTCGGCGC GATCCTCATC
CGATTCTTCG TCCGGAAACT GATCGACCGA CTCACCCGGA CGTCGGCCGA GGGCGCGGCC
AAGGTACCCG CGATACTACG GCCCTTGAAG GAACGGGCCC CCGAAGTCCT CGGTCCCGTG
GTGCTGGAGC GGCGTCGGCA ACGAGCCCAG ACCATAGGTT CGTTGCTGAA GTCGCTGACC
AGTTTCGTGG TGTTCGGCTT GGCGTTCGTG CTGATCCTCG GCGAACTGGG CATCAACCTC
GCTCCCATCC TCGCCTCCGC CGGTATCGTC GGCGTGGCCG TCGGTTTCGG CGCGCAGAAC
CTCGTCAGGG ACTTCCTGTC GGGCATCTTC ATGATGCTGG AGGACCAGTA CGGCGTCGGT
GACATCGTGG ACGTCGGTGA GGCCACCGGC ACGGTGGAGT CGGTGGGACT GCGCATCACC
ACACTCCGCG ACCTCAACGG CACTGTCTGG TATGTCCGAA ACGGCGAGGT ACTGCGTGTC
GGCAACTTCA GCCAGGGTTA CGCGGTGGCC GTCGTCGACA TCCCCGTCGG CTACCACAGC
GGCATCGACA AGGCCACGGC CGTGCTGGAA CACGTGGCGA AGAAGGCGGC CGAACTAGAC
TCGATCGCAC CCGACGTTCT GGAGGCCCCG CAGGTCTTAG GCGTTGAGAA CGTCACTCCG
GAAGCCGTCC AACTCCGTCT CACCACCAAG GTGCGGCCCG GCCGCCAGTG GGCCGTGCAA
CGCGCTCTTC GAGCCGAGAT CATGCGGGCA CTGGAGCGCG AGGGCTTCGA ACCGCCGCTC
GGCCTGTTCC TGGGGGCCCG TGGCCGAAAC GGTGAGCCGG CCGACAGCTG A
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| Protein sequence | MEQFLSEPSG SEPPECAQDI GSWCQQVWEI TGNPWLAASA DWLIARPLRI LLILLGAILI
RFFVRKLIDR LTRTSAEGAA KVPAILRPLK ERAPEVLGPV VLERRRQRAQ TIGSLLKSLT
SFVVFGLAFV LILGELGINL APILASAGIV GVAVGFGAQN LVRDFLSGIF MMLEDQYGVG
DIVDVGEATG TVESVGLRIT TLRDLNGTVW YVRNGEVLRV GNFSQGYAVA VVDIPVGYHS
GIDKATAVLE HVAKKAAELD SIAPDVLEAP QVLGVENVTP EAVQLRLTTK VRPGRQWAVQ
RALRAEIMRA LEREGFEPPL GLFLGARGRN GEPADS
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