Gene Svir_11700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_11700 
Symbol 
ID8386507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1206076 
End bp1206927 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content69% 
IMG OID644975260 
Productdihydropteroate synthase 
Protein accessionYP_003133053 
Protein GI257055221 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.407826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCATCG CGAATCCCGT AGCGCTCGCC GGGGCCGCCG AGGTCGCGGC ACGACCGGAT 
GTGGGCCCGT TGCGGGTGAT GGGCATCGTG AACGCCACGC CCGACTCGTT CTGGTCCGGA
AACAGACACG ACACGGCGGA GCGCGCGATC GCTGCGGGAA ACGCGATGTT CGAACTCGGT
GCCTGGGCCG TGGACGTGGG CGGTGAGTCC ACCCGGCCCG GCGCCGAACC GGTCTCGGTC
GCCGAGGAAC TCGACCGGGT CATCCCCGTG GTGTCGGCGT TGTCGGCCGT GGGCACGGTG
TCGGTCGACA CCCGGCACGC GGAGGTGGCC GAGGAGGCCG TGCGGGCGGG GGCGTCGATC
ATCAACGACG TGTCCGGGAC CTTGGCCGAG GTCGCGGCAC GGCTCGGGGT CGGTTACGTC
GGGATGCATT CCCACACCGT GCCGGTGGTG CCCGACGTGT ACCCCGATTA CGACGACGTC
ACCACCGATG TCGCCGCTCA CCTGAGGTCC GTGGGTGAGA TCGCCCGCCA GGGCGGTGCG
GGGCCGGTGT GGATCGATCC CGGCATCGGC TTCGGTAAGT CCTTACAGGA CAATCTGGAG
CTGTTGCGGC AGTTGCCCGC GTTGTGTTCA CTCGGTTTCC CGGTACTGCT GGGGGTGAGC
CGGAAGTCGT TCCTCGGCGA GTTGACCGGC AGAGCGGTGG CCGATCGTCT GGCGGGATCG
TTGGCGGTGG TGGCACCCGC GTGGTCCGCC GGGGTCGATG TCATCAGGGT GCATGACGTG
GCCGAGACCC TCGACACGAT CGCCGTGCTC GAGGCCGTCT GGGGCAGGAA GGACAGCGAA
CCGTCCCGCT GA
 
Protein sequence
MTIANPVALA GAAEVAARPD VGPLRVMGIV NATPDSFWSG NRHDTAERAI AAGNAMFELG 
AWAVDVGGES TRPGAEPVSV AEELDRVIPV VSALSAVGTV SVDTRHAEVA EEAVRAGASI
INDVSGTLAE VAARLGVGYV GMHSHTVPVV PDVYPDYDDV TTDVAAHLRS VGEIARQGGA
GPVWIDPGIG FGKSLQDNLE LLRQLPALCS LGFPVLLGVS RKSFLGELTG RAVADRLAGS
LAVVAPAWSA GVDVIRVHDV AETLDTIAVL EAVWGRKDSE PSR