Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_11240 |
Symbol | |
ID | 8386461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1159974 |
End bp | 1160537 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644975214 |
Product | phosphoheptose isomerase |
Protein accession | YP_003133007 |
Protein GI | 257055175 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0279] Phosphoheptose isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.787149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.184865 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGAAG AGCATTTCCG AGCACTGAGC GAGGCCCTGC GTCGAATGCG CACCGCGGCG CCGACGATCG AATCGTGGGC TGAACACCTC GCCGGTGTGC TCACCGGTGG CGGCCGGTTA CTGGCCTGCG GCAACGGCGG GAGCGCGGCC GAGGCGCAAC ATCTCACCGG CGAGCTGGTG GGCAAGTTCC GCCACGATCG GCAGCCGCTG TCGGCCATCG CCCTGCACGC CGACACCTCG ACGACCACGG CGATCGCCAA CGACTACGGC GAGCACGAGC TGTACGCGCG GCAGGTACGG GCGCACGGCC GTCCCGGTGA CGTACTCGTG GCGTTGTCCA CGAGCGGTCG GAGTCAGAAC GTGGTGACCG CCGCGAAGGT GGCCCACGAA CAGGGAATGG TGACATGGGC GTTGACCGGC CCCGAACCCA ATCCGCTGAC GTCGTTGTGC ACCGACGCCA TCGCCGTGGA CGCCGACCAC GTGGCCACCG TGCAGGAGGT GCATCTGGTC GTCGTGCACG CGTTGTGCGC ACAACTCGAC CGCATTCTGG GAGTGCCCGC GTGA
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Protein sequence | MIEEHFRALS EALRRMRTAA PTIESWAEHL AGVLTGGGRL LACGNGGSAA EAQHLTGELV GKFRHDRQPL SAIALHADTS TTTAIANDYG EHELYARQVR AHGRPGDVLV ALSTSGRSQN VVTAAKVAHE QGMVTWALTG PEPNPLTSLC TDAIAVDADH VATVQEVHLV VVHALCAQLD RILGVPA
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