Gene Svir_10790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_10790 
Symbol 
ID8386416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1112002 
End bp1113018 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content67% 
IMG OID644975169 
Productbiotin synthase 
Protein accessionYP_003132962 
Protein GI257055130 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0502] Biotin synthase and related enzymes 
TIGRFAM ID[TIGR00433] biotin synthetase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGCCG CAACCACGGA ATCGGGAATT CTCGCCGTCG CGCGTGAGCA GGTACTCCAG 
AAGGGGATCG GTCTGTCCCA GCAGCAGGTG CTCGAGGTGC TGCGCCTCGG TGACGAACAC
ATCCCCGAAC TGCTGTCCCT CGCTCACGAG GTGCGCATGA AATGGTGTGG TCCCGAGGTG
GAGGTCGAGG GCATCGTCAG CGTCAAGACC GGCGGTTGTC CGGAGGACTG TCACTTCTGT
TCGCAGTCGG GCCGGTTCCC CACACCGGTG CGCTCGGCGT GGCTGGACAT CCCCGGTCTG
GTGAAGGCCG CCGCCGAGAC CGCGGCCACG GGCGCGACGG AGTTCTGCAT CGTGGCGGCC
GTGCGCGGCC CGGACGCGCG ACTGATGTCG CAGATCCGCG ACGGCATCAA GGCGATCCGC
GACTCCGGCA ACGACATCCA GATCGCGTGC TCGCTCGGCA TGTTGACGCA GGAACAGGTC
GACGAGCTCG TCGACATGGG GGTGCACCGC TACAACCACA ACCTGGAGAC CGCCCGCTCG
CACTTCCCCA ACGTCGTCAC CACGCACACG TGGGAGGAGC GGTGGGAGAC CCTGCAGCGG
GTGCGGGCCG CGGGAATGGA GGTGTGTTGC GGCGGCATCA TCGGCATCGG GGAGACGCTG
GAGCAGCGTG CCGAGTTCGC GGTCCAGCTC GCCGAGCTCG ATCCGCACGA GGTGCCGATG
AACTTCCTCA TCCCTCAGCC CGGTACGCCG TACGAGTCGT ACGACGTGGT GGAGGGCAAG
GACGCGCTGC GTGTCGTGGC GGCGTTCCGA CTGGCCATGC CCAGGACGAT GCTGCGCTTC
GCGGGAGGTC GGGAACTCAC CCTCGGCGAC CTGGGAGCCG AACAGGGCAT GCTCGGTGGG
ATCAACGCGA TCATCGTCGG GAACTACCTG ACCAACCTGG GACGTCCCGC TGCTCAGGAC
CTGAGCATGT TGGACGACCT GCGGATGCCG ATCAAGGCGT TGAGCGACAC CCTGTGA
 
Protein sequence
MTAATTESGI LAVAREQVLQ KGIGLSQQQV LEVLRLGDEH IPELLSLAHE VRMKWCGPEV 
EVEGIVSVKT GGCPEDCHFC SQSGRFPTPV RSAWLDIPGL VKAAAETAAT GATEFCIVAA
VRGPDARLMS QIRDGIKAIR DSGNDIQIAC SLGMLTQEQV DELVDMGVHR YNHNLETARS
HFPNVVTTHT WEERWETLQR VRAAGMEVCC GGIIGIGETL EQRAEFAVQL AELDPHEVPM
NFLIPQPGTP YESYDVVEGK DALRVVAAFR LAMPRTMLRF AGGRELTLGD LGAEQGMLGG
INAIIVGNYL TNLGRPAAQD LSMLDDLRMP IKALSDTL