| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_09980 |
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| Symbol | |
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| ID | 8386335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1023507 |
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| End bp | 1024712 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644975088 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_003132882 |
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| Protein GI | 257055050 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.470481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCTC CACGGACGGT GCTGGTGCTG GGTTCCACCG GCTCGATCGG CACGCAGGCA
CTCGACGTCA CCGGGCGTAA CCGGGACCTG TTCCGCGTGG TCGGTCTGGC CGCGGGTGGC
TCCGATCCGC AGGCACTGGC CGAACAGGTG ATCGCCCACG AAGTCGAGGC GGTGGCGGTC
ACGCGGGCGA CGGTCGTGGA GGACGTGCAG CTGGCGCTGT ACGCGGAGGC GCGGAAGCGG
GGTTACGCCC GGGGCGAGTT CCGGTTGCCC CGCATCTTCG CCGGGCCGGA CGCCGTGGAG
GAGCTGATCG ACGCCGTGCC CGCCGATGTG GTGCTCAACG GCATGCCCGG TTCACAGGGA
CTCGGGCCGA CGCTGCGGGC CCTCAAGACC GGTGCCACGC TCGCGCTGGC CAACAAGGAG
TCGCTGATCG CGGGTGGCCC GTTGGTGCGG GCGGCGGCAC GCCCGGGGCA GATCGTGCCG
GTGGACTCGG AACACTCGGC ACTGGCGCAG GCGCTGCGCG GTGGCCGTGC CGAGGAGGTC
AGTCGACTGG TGCTCACCGC ATCGGGTGGC CCGTTCCGGG GCCGCACGCG GGAGCAGTTG
GTCGACGTCA CCGTCGAGGA CGCGTTGGCC CACCCGACCT GGGCGATGGG GCAGCTCGTC
ACGATCAACT CGGCGACGTT GGTGAACAAG GGCCTGGAGC TGATCGAGGC CCACTTGCTG
TTCGACATCC CGTGTGAGCG CATCGACGTG GTGGTGCACC CGCAGTCGAT CGTGCACTCG
ATGGTGACGT TCGTGGACGG CTCGACGTTG GCGCAGGTCA GCCCGCCTGA CATGCGGCTG
CCCATCGCGC TGGCCCTGCA CTGGCCGAAT CGGGTGCCGG ACGCCATCGC GCCGTGTCGT
TGGGACGAGG CGGCCACCTG GACGTTCGAA CCGGTGGACA ACGAGGCCTT CCCCGCCGTG
GAGCTCGCCC GTCACGTCGG CAGCGAGGGT GGCTGCCTAC CCGCCGTGTT CAACGCGGCG
AATGAGCGAC TCGTCACTGA GTTCCTCGCA CACAACACCA GCTTCACGTC CATCGTGGAC
ACTGTTGCCG AGGTCGTCGA GGCAGCTGAC GAGTGGCGTC GTCCGCCCCG TGACCTGGCC
GATGTCCTCG CTGCGGAACA ATGGGCGCGC GACCGTGCGA CCACGATCAT GTCGGGAGGG
AAGTAG
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| Protein sequence | MSSPRTVLVL GSTGSIGTQA LDVTGRNRDL FRVVGLAAGG SDPQALAEQV IAHEVEAVAV
TRATVVEDVQ LALYAEARKR GYARGEFRLP RIFAGPDAVE ELIDAVPADV VLNGMPGSQG
LGPTLRALKT GATLALANKE SLIAGGPLVR AAARPGQIVP VDSEHSALAQ ALRGGRAEEV
SRLVLTASGG PFRGRTREQL VDVTVEDALA HPTWAMGQLV TINSATLVNK GLELIEAHLL
FDIPCERIDV VVHPQSIVHS MVTFVDGSTL AQVSPPDMRL PIALALHWPN RVPDAIAPCR
WDEAATWTFE PVDNEAFPAV ELARHVGSEG GCLPAVFNAA NERLVTEFLA HNTSFTSIVD
TVAEVVEAAD EWRRPPRDLA DVLAAEQWAR DRATTIMSGG K
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