Gene Svir_09920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_09920 
Symbolfrr 
ID8386329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1018548 
End bp1019105 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content61% 
IMG OID644975082 
Productribosome recycling factor 
Protein accessionYP_003132876 
Protein GI257055044 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.95344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGACG AGACCCTCTT CGATGCCGAA GAAAAAATGG AAAAAGCGGT CTCCTTCGCC 
AAGGAGGAAC TGGCGTCGGT ACGCACCGGT AGGGCTACTC CCGCGATGTT CTCACGCATC
GTTGTGGAGT ATTACGGAGC GCCGACGCCG CTCAACCAGC TCGCGAGCGT CAACATTCCC
GAGGCCAGGA TGGCCATCAT CAAGCCTTAC GACGGTTCGC AGCTCGCGAA TATCGAGAAG
GCGATCAGGG AGTCCGACCT CGGTGTGAAC CCGACCAACG ACGGCAGCAT CATCCGTGTG
GTGATTCCTC AGCTCACCGA GGAACGTCGC AAGGAGATGG TCAAGATCGC CAAGGGGAAG
GGTGAGGAGG CTCGGATCTC CATTCGCGGC ATCCGGCGCA AGGCCAAGGA GGAGCTCGAC
CGGATCGCCA AGGACGGTGA GGCCGGCGAG GACGAGGTCG CCCGCGCCGA GAAGGAGCTG
CAGAACCTGA CGGACCGCTA TGTCCATCAG GTCGACGAGC TCGTCAAGAA CAAGGAAGCC
GAGCTCCTCG AGGTCTGA
 
Protein sequence
MIDETLFDAE EKMEKAVSFA KEELASVRTG RATPAMFSRI VVEYYGAPTP LNQLASVNIP 
EARMAIIKPY DGSQLANIEK AIRESDLGVN PTNDGSIIRV VIPQLTEERR KEMVKIAKGK
GEEARISIRG IRRKAKEELD RIAKDGEAGE DEVARAEKEL QNLTDRYVHQ VDELVKNKEA
ELLEV