Gene Svir_09660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_09660 
Symbol 
ID8386303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp995534 
End bp996217 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content67% 
IMG OID644975056 
Producthypothetical protein 
Protein accessionYP_003132850 
Protein GI257055018 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.275829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.336437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGAGG AAGGGAAGAT GCGCAGGATG TCGTGGACGC GCAGTGTGAT CGCTCTCATC 
GTCGGGTGTG CCCTCGCGGT CGTCGCCGGC TGTGACACCA CGACCTCGGG TACACCGTCG
ACTCCGACGG ATGCCGGGAG CGAGGAACAG TCCACGGCCT CGCCCACCAC GCCACAGTCC
CCCGGGGCCG CTCCGGTCGC CGAATTGCCG GTGCCGATCG AGTTCTCGTT GCCGGACGGT
TGGCAGTCGG TGCCGCCCAG CGAGGTCAAT GCCGACAATG CCGCTTTCGT GGCCGTACAT
CCGGGCTTCA GCGGCGACGG GTTCACCCCC ACGATCGTCA TCGCCGGTGA CGTCCACGAC
GGTGGGACGA CGCTGACCCA GCTCGCGGAG GAGGAGTTGG AGCAGCTGCG GACCGTGGAC
CCGGATGTGC GGGTGGAGGA ACGCAGGGAG AGCGGTACGG CGGACCACCC CGGACTGACG
CAGGTGGTGC GCCTTTCCAT GCAACAGAAC GGAAGCGCCC AGGAGCTTTT GCAGATCCAG
ACCCTCATCG GCATGCAGGA CACCCAGGAC CCGGACCGTA AGGCGGTTCT GCGTTTCGCG
CTGACGACTC AGCCGGAGCA TTTCGAGCGG CTGGCCGGTG ACTTCCAGGA GTTCCTCTCC
ACGGTTCGCC CGGAAGGGGC GTGA
 
Protein sequence
MVEEGKMRRM SWTRSVIALI VGCALAVVAG CDTTTSGTPS TPTDAGSEEQ STASPTTPQS 
PGAAPVAELP VPIEFSLPDG WQSVPPSEVN ADNAAFVAVH PGFSGDGFTP TIVIAGDVHD
GGTTLTQLAE EELEQLRTVD PDVRVEERRE SGTADHPGLT QVVRLSMQQN GSAQELLQIQ
TLIGMQDTQD PDRKAVLRFA LTTQPEHFER LAGDFQEFLS TVRPEGA