Gene Svir_09650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_09650 
Symbol 
ID8386302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp993811 
End bp995376 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content66% 
IMG OID644975055 
Productmalate synthase 
Protein accessionYP_003132849 
Protein GI257055017 
COG category[C] Energy production and conversion 
COG ID[COG2225] Malate synthase 
TIGRFAM ID[TIGR01344] malate synthase A 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.143579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGTGC TCGGCCCGGC TGTCGAGCGT GGCGACGAAA TCCTGACGGA CGAGGCGTTG 
GAGTTCCTCG CCGGTTTGCA CGAGTCCTTC GCTGCTACGC GGGACGAGCT GCTGGAGGCC
AGGAAGCGGC GCCGGGAGGA GGCCAAACGG ACCGGCAGGC TCGACTTCCT ACCGGAGACC
AAGCACATCC GCGAGTCCGA GTGGAAGGTC GCCGAGGCCC CGCCCGCGTT GCGCGACCGT
CGGGTGGAGA TCACCGGCCC CACCGACCGC AAGATGACCA TCAACGCGTT GAACTCCGGC
GCGAAGGTGT GGTTGGCCGA CTTGGAGGAC GCCAACACCC CGCATTGGCG CAACGTCGTG
TCGGGGCAGG TCAACCTGTA CGACGCGGTC CGCAAGACCA TCGAACTCAC CACTGAGAAG
AAGCACTACA AACTGCGTGA CGACATCGAG CACGCCACGA TCGTCGTGCG CCCGCGGGGT
TGGCACCTGG ACGAACGCAA CATCGAGATC AACGGCCGTA AGGCCGTCGG CGCGCTGGTT
GACTTCGGAC TGTACTTCTT CCACAACGCC AAGGAACTGT TGAAGCGGGG CGTGGGCCCG
TACTTCTACC TCCCCAAGAT GGAGAGCCAC CTCGAGGCCC GCTTGTGGAA CGACGTGTTC
ACCCACGCCG AGAAGACGCT CGGCATCGAG CACGGCACCA TCCGCGCCAC CGTGTTGATC
GAGACGATTC CCGCCGCGTT CGAGATGGAG GAGATCCTCT ACGAGCTGCG GGAGCACGCT
TCCGGGCTGA ACGCGGGCCG GTGGGACTAC CTGTTCAGCG TCATCAAGTA CTTCCGTGAC
GCGGGGGAGA AGTTCATCCT GCCCGACCGT AACAGCGTCA CGATGACGGC GCCGTTCATG
CGCGCCTACA CCGAATTGTT GGTGCGTACC TGCCACAAGC GGGGTGCGTT CGCGATCGGT
GGCATGGCCG CGTTCATTCC GAGCAAGGAC CCCGAGATCA ACGAGAAGGC GTTCGCCAAG
GTCCGGGACG ACAAGGCCCG GGAGGCGGGC GACGGCTTCG ACGGCTCGTG GGTGGCGCAC
CCGGGCATGG TCGAGCTGTG CAGGGAACAG TTCGACAAGG TGCTCGGGGA CAAGCCGAAC
CAGCTCGACC GGCTGCGGGA GGACGTGTCC GTGACCGCCG AGCAGCTGCT CGACGTGGCT
TCGACCGAGG GACGCGCCAC CAAGGAGGGC CTGCGTGGCG CAGTGGACGT CGGTGTGCGT
TACATCGCCT CCTGGCTGAG CGGTAACGGC GCGGCGGCCA TCCACAACCT CATGGAGGAC
GCGGCCACCG CCGAGATCTC GCGGTCGCAG GTGTGGCAGT GGGTGCGCAA CGGCGTCGAA
CTCGACACCG GCGAGAAGGT CACCGAGGAG CTGGTGCGTT CGGTCCTCGC AGAGGTGCGC
GACGAATTGG CCGAGCAGAT CCCGGCGGAG ACACTCAGTG AGTCGGTGGA GCTGTTCGAG
CAGGTGGCTC TGGCCGAGGA GTTCGTCGAC TTCCTCACCC TGCCCGCCTA CGAGCGGATC
CAGTGA
 
Protein sequence
MRVLGPAVER GDEILTDEAL EFLAGLHESF AATRDELLEA RKRRREEAKR TGRLDFLPET 
KHIRESEWKV AEAPPALRDR RVEITGPTDR KMTINALNSG AKVWLADLED ANTPHWRNVV
SGQVNLYDAV RKTIELTTEK KHYKLRDDIE HATIVVRPRG WHLDERNIEI NGRKAVGALV
DFGLYFFHNA KELLKRGVGP YFYLPKMESH LEARLWNDVF THAEKTLGIE HGTIRATVLI
ETIPAAFEME EILYELREHA SGLNAGRWDY LFSVIKYFRD AGEKFILPDR NSVTMTAPFM
RAYTELLVRT CHKRGAFAIG GMAAFIPSKD PEINEKAFAK VRDDKAREAG DGFDGSWVAH
PGMVELCREQ FDKVLGDKPN QLDRLREDVS VTAEQLLDVA STEGRATKEG LRGAVDVGVR
YIASWLSGNG AAAIHNLMED AATAEISRSQ VWQWVRNGVE LDTGEKVTEE LVRSVLAEVR
DELAEQIPAE TLSESVELFE QVALAEEFVD FLTLPAYERI Q