Gene Svir_09530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_09530 
Symbol 
ID8386290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp978606 
End bp979127 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content69% 
IMG OID644975043 
Producthypothetical protein 
Protein accessionYP_003132837 
Protein GI257055005 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.243649 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACG CGTTTTCCCA GCCGGTGTTC TCCCCGACGT CGCAGGCACC GGGGCTGCCG 
ACCATGCCCA CGGGCTGGCC CATCGGTTCC TACGACACCT ACGCGGAAGC GCAGCGCGCG
GTCGACCACC TCGCCGGCAA GGACTTCCCC GTACAGGACG TGACGATCGT CGGCGTGGAC
CCCTTGCTGG TCGAACGCGT CGCCACGCGG CTGACCTGGG GCAAGGTGCT CGGTGGTGGA
GCCATGTCCG GCGCATGGTT CGGCCTGTTC GTCGGGGTGC TGCTCAGCCT GGCCACCCCC
GGCCCCGTAT TCACCCCCAT CCTCATCGGC GTGCTGTCCG GCGTGGGCTT CGGACTGGCG
TTCGCGGCGG CGAACTACGC CGTCATGCGG AAACGCCGTA ACTTCATCTC CCACAGCCAG
CTGGTGGCCC GCCGCTACGA CGTGCTGTGC CAGCCACGCA ACGCCGAAAA CGGACGCAAC
CTGCTGGCCC AGTTGGCGAT GTCCGGGCGC CACGACCTCT GA
 
Protein sequence
MTHAFSQPVF SPTSQAPGLP TMPTGWPIGS YDTYAEAQRA VDHLAGKDFP VQDVTIVGVD 
PLLVERVATR LTWGKVLGGG AMSGAWFGLF VGVLLSLATP GPVFTPILIG VLSGVGFGLA
FAAANYAVMR KRRNFISHSQ LVARRYDVLC QPRNAENGRN LLAQLAMSGR HDL