Gene Svir_08860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_08860 
Symbol 
ID8386223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp910653 
End bp911246 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content69% 
IMG OID644974977 
Producthypothetical protein 
Protein accessionYP_003132773 
Protein GI257054941 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGA CTCGGACGAC ACAGACGACA CACGACGGCA CCTCCGGTGA CCAAAGCACC 
GGCACCCGGG GCAAGAGGGC CGTGTTCCGC ATCCCGGGAA CCGCGCTGAT CGGCGTGCTG
ATGCTCTTCA TGTGCATGTT CCCGCTCGCG GCCACCCTGC CGTATCTGCT GGTGCTGCTG
CTCGTGCCCA TCGTCCTGGC CGTGTGGGTC GTCCGCACCC GCACGGAGGC CACGGAACAA
GGCCTCATCG TGCGCACCCT GCGCGGCACC CGGAAACTGG CCTGGGACTC GCTCAAGGGC
TTCACCATCA CCCCGAAGTC CGCGGTCGTC GCGGTACTCC ACGACGACAC CACCGTACCG
CTGCCCTCCG TGCGCACCCG CCACTTGCCG GTGCTGTCGT TGGTCAGCGA CGGCCGGGTC
CCCGATCCGT CGGGTCTGCT CGACCAGCCG GACGACGAGG ACGAGTCCGC CGGCGGCGCC
GACGGCCACT CCGATGAGGA CCCCGCCGAC TCCGGCAAGG ACTCCGCCGG CGACCCCGAC
AACGGCTCCC AGAACGACTC CGGCGAGGAC GACACGGGCC GAAACGACAA GTAA
 
Protein sequence
MTSTRTTQTT HDGTSGDQST GTRGKRAVFR IPGTALIGVL MLFMCMFPLA ATLPYLLVLL 
LVPIVLAVWV VRTRTEATEQ GLIVRTLRGT RKLAWDSLKG FTITPKSAVV AVLHDDTTVP
LPSVRTRHLP VLSLVSDGRV PDPSGLLDQP DDEDESAGGA DGHSDEDPAD SGKDSAGDPD
NGSQNDSGED DTGRNDK