Gene Svir_08340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_08340 
Symbol 
ID8386171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp850926 
End bp851834 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content73% 
IMG OID644974925 
Product4-hydroxybenzoate polyprenyltransferase-like prenyltransferase 
Protein accessionYP_003132721 
Protein GI257054889 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGAC TGACGGCCCG GGAACTCGCC GCCGTACACC GGTTGGAGTT CCCGTTCTGG 
GTCAACACCG TGTGCCAGGC GTTGTGGGGC GCATGTTTCG CGGTGGCCGC GCCCACCGAG
CTGGTGGCCT GGCCGGTGCT GCTGGCCGTG GTCGCGAACA TCGTGCTCAT GGAGGCGGGG
CTGGTGTTGA ACGCCGTCGC CGACCTCGAC AGCGACGCCC GACACCCCGA ACGCGGACGA
CTGGCGAACG CGGTGCTGAA GCTGGGTGGT CGAGACGGCC TCCGGCTGGT GACGGCCGAG
TTCGTCCTCG GTGGCTCGCT CGCGGTCGCC GTCTCGGTCT GGACGGGGCA CTGGCTCGTG
GCCCTGGCGG CCGCGGGCAC CGTCGCGGCC CACGTGCTCT ACAACGTCGA GCCGATGCGG
TGGAAGTCGC GTGGTCTGCC CGGCGCGGCG GTGTTCGCGT GCGGGGTCAT CGCACTGCCG
TTCGTCACCG CCCATGCGGC CGTGCGCGCC GACCTCCCAC CGGAGGCCGT GCTCACGTTC
GGGGGGTTGA CGCTGCTGGC CACGGGACGC GTGGTGTGGT GGTCGGTTCC CGACCGCGAG
GCCGACGCCG CCGCGGGCCA GCGCACGACG AGCGTGCGGC ACGGTGCCGT ACGCGCACTC
GCCCTGGCGT GCCTGCTCCT GTGCGCCGGG GTGTTCGCGC TGTCGTGGGG CCTGTGGTGG
TACGGGGGTC CGGTGGCGGC CCTCGTGGGC GCGGGCGGAC ACGTGGTGTT CACCGGAACG
GTGGTGGCAC TGCTGCGGCG GGTGCGGGTG AGACGTCCGA CGAGTTCCAC CCGACTCCGG
ACGACGGTCA TGCCGGTGGT GCTCGCGGCC GACGTCCTCC TCGTCGGAGT GGGATTGGCG
ACGGGCTGA
 
Protein sequence
MPRLTARELA AVHRLEFPFW VNTVCQALWG ACFAVAAPTE LVAWPVLLAV VANIVLMEAG 
LVLNAVADLD SDARHPERGR LANAVLKLGG RDGLRLVTAE FVLGGSLAVA VSVWTGHWLV
ALAAAGTVAA HVLYNVEPMR WKSRGLPGAA VFACGVIALP FVTAHAAVRA DLPPEAVLTF
GGLTLLATGR VVWWSVPDRE ADAAAGQRTT SVRHGAVRAL ALACLLLCAG VFALSWGLWW
YGGPVAALVG AGGHVVFTGT VVALLRRVRV RRPTSSTRLR TTVMPVVLAA DVLLVGVGLA
TG