| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_08220 |
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| Symbol | |
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| ID | 8386159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 838706 |
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| End bp | 840811 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644974913 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_003132709 |
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| Protein GI | 257054877 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATCGG CACGATCCTG CTTCATCACG ACCGGGGAGA GCGACCACGT GACTGCCTCT
GCTGAGAACC TCTACGGGGC CGACGACCTC ACGCACCTTG AAGGTCTCGA AGCGGTGCGC
AAGCGGCCCG GCATGTACAT CGGTTCCACC GACAGTCGCG GGGTCAACCA TCTGTTCACC
GAGATCGTCG ACAACTCCAC CGACGAGGGT GTCGCGGGCC ACGCCACGAA GATCGTGGTC
ACGTTGCACG CCGACGGCAG TGTGGAGGTC GACGACGACG GCCGCGGCAT CCCCACGGGA
ACGCACGGCA AATCCGGTCT CAGCGGCGTG GAGCTCGTGC TGACCCGGCT GCACGCGGGC
GGGAAGTTCG GCGGCTCCGG GTACAAGGCC TCGGGCGGAC TGCACGGTGT GGGGGCGTCC
GCCGTCAACG CGCTGTCGTT GCGGTTGGAC GTGACGGTCA AGCGCGACGG CAAGGTGCAC
GAGATGTCCT TCCGTCGTGG GGTGCCCGGC ATCTTCGACG GCCCCGGCCC CAGGGCGAAG
TTCACCCCGA AGTCGGGTCT GCGGTTCGTG CGGAAGATGA AGCGCGGTGA GTCCACCGGA
ACCACCATCC GGTACTGGCA CGACGCCCGG TACTTCGAGA AGGGCGCGGC GCTGGACCCG
GAACAGGTGC GCATGAAGCT GCGGAACACC GCGTTCCTGG TGCCCGGTGT GACCTATGTG
CTGCGTACGG CCACCGACTC CACCATCAAC GAGGAGACGT TCCACTACCC CAACGGACTG
GTGGACATGG TCGAGTTCCT CGCCCCCGCG GGGGACCGTC CGGTGTGTGA CACGCAGCTC
ATCACGGGGG AGGGCACGTA CCGGGAGAAC GCCGCCGACG CCAACGGCGT CATGCAGTCG
AATGTGGAAC GCCGCGCCGA GGTGGAGATA GCGCTGCGGT GGGGCACCGG TTACGAGCGC
ACGGTGGAGT GCTTCACCAA CACCATCCGC AACATCCACG GCGGCACCCA TCGGAAGGGC
TTCGAACGCG GGCTCGTGCG CGCGGTGCAC GACGCCATCT CCAAGACGCG TGGGCTGCTC
AAGCCCAAGG AGGAACCGCC GATCCTCGAC GACGTGTGCG AGGGGTTGAC CGCGGTCGTC
CACGTGCGCA TCCCCGAGCC GCAGTTCACC TCGCAGACCA AGGACGAGTT GTCCACCGCG
GGGATCACGA AGGTGGTCCA GGGGCTCGTC GAGAAGCACA TCAAGGCGTG GGCCGAGCAC
CGCAGGACCA GGGCCGAGGT CAAGACGGTG CTGCAGAAGA TCGTCGACGC CTCGCGGGTG
CGGCTGGCGC AGAAACAGCA GAAGGACGCC GCCCGCCGTA AGACCGCCCT CGAGGGCGCG
GCCATGCCGC CGAAACTCGT GGACTGCCGC AGCACCGGCG TGTCCCGAAG CGAGCTGTTC
CTCGTGGAGG GTGACAGCGC GCTCGGCTCG GCGCGACTGG CGAGGGTGTC GGAGTACCAG
GCGCTGTTGC CGCTGCGCGG CAAGATCCTC AACGTGCAGA AGGCCAATCT CAGCGAGGCG
TTGAAGAACG CCGAGATCGC CTCCATCGTG CAGGTGCTGG GAGCGGGCAC GGGACGCACG
TTCGACATCT CCTCGATGCG TTACGGCCGG GTGATCCTCA TGGCCGACGC CGACGTGGAC
GGCTCCCACA TCCGCACGCT GCTCATCACC CTGTTCGCGC GGTACATGCG CCCGGTGATC
ACCGAAGGCC GCCTCTACGC CGCCATGCCC CCGCTGCACA AGATCGTCAC GAAGGGGCGG
AAGCCGGAGA CCCACTACAC CTACACCGAG CGGGAGATGG AGGCGAAGGT CGCCGAACTG
GAGCGGTCGG GCAAGCAGGT GGTCAAGCCG GTGCCCCGGT TCAAGGGGCT CGGTGAGATG
GACGCCGACG AGCTGTGGGA GACCACGATG AACCCCGCGA CGCGTTCGGT CCGGCGCATC
ACCCTGGACG ACGTCGACGC CGCCGAGGCC ACGCTGGAAC TGCTCATGGG TGAGAAGGTC
GAGCCCCGCC GCAAGTGGCT CATCACCTCG GCCGAGCGGG TCAACCAGGC TGCGATCGAC
ATCTGA
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| Protein sequence | MRSARSCFIT TGESDHVTAS AENLYGADDL THLEGLEAVR KRPGMYIGST DSRGVNHLFT
EIVDNSTDEG VAGHATKIVV TLHADGSVEV DDDGRGIPTG THGKSGLSGV ELVLTRLHAG
GKFGGSGYKA SGGLHGVGAS AVNALSLRLD VTVKRDGKVH EMSFRRGVPG IFDGPGPRAK
FTPKSGLRFV RKMKRGESTG TTIRYWHDAR YFEKGAALDP EQVRMKLRNT AFLVPGVTYV
LRTATDSTIN EETFHYPNGL VDMVEFLAPA GDRPVCDTQL ITGEGTYREN AADANGVMQS
NVERRAEVEI ALRWGTGYER TVECFTNTIR NIHGGTHRKG FERGLVRAVH DAISKTRGLL
KPKEEPPILD DVCEGLTAVV HVRIPEPQFT SQTKDELSTA GITKVVQGLV EKHIKAWAEH
RRTRAEVKTV LQKIVDASRV RLAQKQQKDA ARRKTALEGA AMPPKLVDCR STGVSRSELF
LVEGDSALGS ARLARVSEYQ ALLPLRGKIL NVQKANLSEA LKNAEIASIV QVLGAGTGRT
FDISSMRYGR VILMADADVD GSHIRTLLIT LFARYMRPVI TEGRLYAAMP PLHKIVTKGR
KPETHYTYTE REMEAKVAEL ERSGKQVVKP VPRFKGLGEM DADELWETTM NPATRSVRRI
TLDDVDAAEA TLELLMGEKV EPRRKWLITS AERVNQAAID I
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