11 homologs were found in PanDaTox collection
for query gene Svir_08140 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_08140  hypothetical protein  100 
 
 
216 aa  433  1e-121  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4592  hypothetical protein  46.56 
 
 
201 aa  151  5.9999999999999996e-36  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2624  hypothetical protein  47.03 
 
 
412 aa  146  3e-34  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.541634 
 
 
-
 
NC_007777  Francci3_1944  hypothetical protein  41.94 
 
 
227 aa  123  2e-27  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3816  hypothetical protein  40.5 
 
 
229 aa  122  4e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.643884  normal  0.0372991 
 
 
-
 
NC_013739  Cwoe_2543  hypothetical protein  38.5 
 
 
235 aa  119  3e-26  Conexibacter woesei DSM 14684  Bacteria  normal  0.117071  normal  0.344366 
 
 
-
 
NC_009077  Mjls_2128  hypothetical protein  36.76 
 
 
213 aa  113  2.0000000000000002e-24  Mycobacterium sp. JLS  Bacteria  normal  0.109674  normal  0.0130152 
 
 
-
 
NC_009921  Franean1_2490  hypothetical protein  35.82 
 
 
232 aa  113  2.0000000000000002e-24  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_2141  hypothetical protein  34.76 
 
 
213 aa  111  7.000000000000001e-24  Mycobacterium sp. MCS  Bacteria  normal  0.686626  n/a   
 
 
-
 
NC_008705  Mkms_2187  hypothetical protein  34.76 
 
 
213 aa  111  7.000000000000001e-24  Mycobacterium sp. KMS  Bacteria  normal  normal  0.220021 
 
 
-
 
NC_008726  Mvan_2412  hypothetical protein  36.02 
 
 
212 aa  110  1.0000000000000001e-23  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.100604  normal  0.339775 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>