Gene Svir_08100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_08100 
Symbol 
ID8386147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp829062 
End bp829682 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content69% 
IMG OID644974901 
Productphosphoheptose isomerase 
Protein accessionYP_003132697 
Protein GI257054865 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTGACC GTCATGTTTT CGACGACCAC GTCGACGCCG CGTTCGCCCG CCGTCACCAG 
CCGCTGGAAG CGCTGCTCGA CGAGGCGGAC CGGGTGGCCC GCGCCTGCCA CGCGATGGCG
GAGCGGTTCC ATCGGGGCGG CACGCTCGTC GTGTTCGGCA ACGGAGGCGG TTCCACCGAC
GCCGCACACA TCTCCGTGGA ATTCGTCCAC CCGGTGATCG TGGGCAAACG TGCACTGCCC
GCCCTGTCCC TCACCTCCGA CGTCGCCACC ATGACGGGGA TCGCCGCGCG GGTGGGGTTC
GCCGAGGTGT TCGCCCACCA GCTACGGCAC CTGGCGGGTG CCGACGACAT CGCGCTCGGA
CTGTCGATGG ACGGCAACTG CGCCAACGTG CTGCGCGGCT TCGAACAGGC CCGCGAGCTC
GGGATGCTCA CCGTCGCCCT CACGGGCGGC GACGGTGGCG CCGTGGCCAC CAGTCCCGCC
GTCGACCACG TGCTGCGCGC CGACTCCACC GACCCGCGTC TGATCAAGGA GGTGCACGTG
ACGATGTACC ACGTCCTGTG GGAACTGGTG CACGTGTTCT TCGAACACCC GGGGGCGCTC
ACGCCGGAGC CGGTGTCATG A
 
Protein sequence
MFDRHVFDDH VDAAFARRHQ PLEALLDEAD RVARACHAMA ERFHRGGTLV VFGNGGGSTD 
AAHISVEFVH PVIVGKRALP ALSLTSDVAT MTGIAARVGF AEVFAHQLRH LAGADDIALG
LSMDGNCANV LRGFEQAREL GMLTVALTGG DGGAVATSPA VDHVLRADST DPRLIKEVHV
TMYHVLWELV HVFFEHPGAL TPEPVS