Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_08080 |
Symbol | |
ID | 8386145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 828161 |
End bp | 828835 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644974899 |
Product | phosphoheptose isomerase |
Protein accession | YP_003132695 |
Protein GI | 257054863 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0279] Phosphoheptose isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG CGATGAGCTC GTTGTACCCG TTCCTCCGAT TCGACGACTC CCCCGGTGAG CCGAGCGCGG AGTCGAGGCG CTCGGTCGAC GCCGTGCTCG CCGAGGTTCG CCGGTCCACG ACGGACAAAG CGCGCGAGAT CATGGAATTA CGGCGGCACG TGCACCGCGA ACAACGACAC CTGCTCGCCG CCTGCGGCAC CGCCATGGCC GAACGGTTCG CCCGGGGCGG CAGGTTGTTC GCCTTCGGCA ACGGTGGGAG TTCCACCGAC GCCGCCGATC TGGCCACTCA GTTCCTCGAC CCGCCCCCGG GGTCGCCGCC GCTACCCGCG TTCGCGCTCA CGGCCGATGC CGCGGTGGTG ACGGCGTTGA GCAACGACGT GGGCTTCGAC CTGGTGTTCT CCCGGCAACT CGCGGCGCTC GGCCGGGAAA GTGACATCGC GGTCGGCCTG TCCACCAGCG GGAACTCGAC CAACCTGCTG GCGGCGTTCG ACGAGGCCAA ACGCATCGGG ATGCTCACCG TGGGCATCAC CGGCGGCGAC GGGGGCCGGA TGGCCGAACT GGACTCGATC GACTTCCTGT TCGCGGTGCC CTCGGCGTCG GTGCACCGGG TCCAAGAGGC CCAGACGACG ATCTACCACG TGCTCGCCGA ACTCTCCGTG GAGGGTGTGC GATGA
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Protein sequence | MTDAMSSLYP FLRFDDSPGE PSAESRRSVD AVLAEVRRST TDKAREIMEL RRHVHREQRH LLAACGTAMA ERFARGGRLF AFGNGGSSTD AADLATQFLD PPPGSPPLPA FALTADAAVV TALSNDVGFD LVFSRQLAAL GRESDIAVGL STSGNSTNLL AAFDEAKRIG MLTVGITGGD GGRMAELDSI DFLFAVPSAS VHRVQEAQTT IYHVLAELSV EGVR
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