Gene Svir_07520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_07520 
Symbol 
ID8386090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp778860 
End bp779588 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content68% 
IMG OID644974847 
Producthypothetical protein 
Protein accessionYP_003132645 
Protein GI257054813 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.40957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGAA AGCAGGACAA GGAAGCTGCC AAGCAGGCCA AGCAGGAGAA GCGCGCAGCC 
AAGAAGGCGA GGCGGGCGCA GATCTTCCAA GCGTTCTCGA TGCAACGCAA GGAGGACAAG
GCTCTCATCC CCTGGATGCT GGGGTGGTTC CTCGTCGTGG CCGGCGCGGT CTTCGGCCTG
GGTTGGCTCA TGGGCATCCA GTGGTGGCTG TTGCCCATCG GCATCATGTT GGGCCTGCTC
GCCGCCGTGA TCGTGTTCGG CCGTCGGGTG CAGAAGACGG TGTACACGAA GGCCGAGGGA
CAACCCGGCG CGGCCGCCTG GGCGCTGGAC AACCTGCGTG GCCGCTGGCG CGTGACACAG
ACCGTCGCCG CGACGACACA GCTCGACGCC GTGCACCGTG TGCTGGGTGG GCCCGGCATC
ATCCTCGTGG GTGAGGGCGC GCCGCACCGG GTGAAGAACC TGCTCGCGCA GGAGAAGAAG
CGCATCGCAC GGCTCGTGGG TGACACCCCG ATCTACGACG TGATCGTGGG TACGGGTGAG
GGCCAGGTGC CGCTGCGGAA GTTGCAGGGC TACCTCATGA AGCTCCCCCG CAACCTCAGG
GGCCGGGAGG TCGACGCGCT CGAGACCAAG CTCGCGGCGT TGGGCAACCG GGGCGCGGCC
ATGCCGAAGG GGCCGATACC GCAGGGCGCC AAGATGCGGA ACCTGCAGCG CACCATCCGG
CGTCGCTGA
 
Protein sequence
MAGKQDKEAA KQAKQEKRAA KKARRAQIFQ AFSMQRKEDK ALIPWMLGWF LVVAGAVFGL 
GWLMGIQWWL LPIGIMLGLL AAVIVFGRRV QKTVYTKAEG QPGAAAWALD NLRGRWRVTQ
TVAATTQLDA VHRVLGGPGI ILVGEGAPHR VKNLLAQEKK RIARLVGDTP IYDVIVGTGE
GQVPLRKLQG YLMKLPRNLR GREVDALETK LAALGNRGAA MPKGPIPQGA KMRNLQRTIR
RR