Gene Svir_07290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_07290 
Symbol 
ID8386067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp749782 
End bp751710 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content67% 
IMG OID644974824 
Producthypothetical protein 
Protein accessionYP_003132625 
Protein GI257054793 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGTGG CGGTGCTGGG GTTGCAGCTG ACGCTCACCG CACCCGCCTC GGCGCAGAGC 
GGCTGTGAGG CACCGAACCC CGAACGTCCC GGTTCGGGCA TGGTGGGGGC GATCGATCCT
CCCGCAGGTA ATGGTGAAGA CGGCAGCGCC TATCTCGATT ACAGCTACGC CGGCATGGTG
TGGCACGTCT ACGACTGCGA CAGCGGCGCG CTCAGCCTCG GTTCACCCGA GTCCACCATC
GACACGTGGG CGGGCAACCA GCTGTTCAAC ATCGCCAAGA ACATCGTCGG AGCCACCAAC
TCCCTGCACT ACACGGTGCT GGAAGGCGGC CTGCTCAACC CCATCTACAA CGCCGTCTCC
CGGGGCGCGG AGACGGTGTA CGACAACATC TACACCCAGC TGTTCGGGCT GGCCGCCCTG
TTGTTGGCGA TCCTGCTCTT CCGGAACATC TGGCGCGGTG ATCTGTCCAC GGTCAGCAAA
CGCGCCCTGT TCGCGCTCGG CGGGGTGTGG TTGGCGGCGT CCTCCATGGC GTTGCTGCGC
TACTACGACG AGATCGACAA CGCGATCGTG CAGACCACCA CGAACATCCA GGCCGGTTTC
GTGGACGAGG CGGAGAACCG GATTGTCCGT GATGTGCTGC CCACCGATCT GCACAACGAG
GTGGTCTACA AGAACTGGTT GCGTGGTGAG TTCGGTTCGC CCGACTCGCC GCAGGCCGAG
GAATACGGCA GGGACCTGCT GGACGCCCAG GCGTTCACCT GGGAGGAGAT GCGCAACGGC
GACGACGCCG ATGAGGAACT GATCGAGGAG AAGAAGGCCT CGTACCAGGC GATCGCGAAC
CAGCTCGGTC CGGCCACCGG TTACTTCACC GGTGAGGACG GCAGCCGTAC GGGCGTGGGT
TTCCTCGCGC TCATCCAAAG CCTGTGTTAC GCGTTGTTCC AGCTGTTCGC CAAGGCCGCC
GTGCTGTTGG CGCAGATCCT GGTCCGGTTG TTCACGTTGA CGGCACCGTT GATCGGACTC
ATCGCGATCC TGCACCACGA CATCCTGCGT CGAGTGGGCA GAGTCGTGGG CACGGTGGCG
TTCAACCTGC TCGTGCTGTC GGTGCTCGCG GGTGTGCAGG CGCTGCTGCT GCGGGCGATC
TTCTCCGCGG GCAGCGCGCT GTCGATGCTG ACGCAGATGG TCGTCGCCGG ACTGATCACC
GTTCTGCTGT TCATGGTGGG CAAGCCGGGT AAGCGGTTGT GGCAGATGGT GGAGATGTCG
GTGGGCATGG TGGGGGCCGC CGTGCCGAGC CCCCGCGGGG GACTGTTCTC GCGGTTCCGC
CGGAACGCCG ACAAACCCAG TCCGCAGGAC GAGTTCTGGA AGACGGTCGC CGAGGAGGAC
GCCGCCGAAG GCGGTGCCGC CACCCGCGGT ACGGGTGGGG TGCTCTCGGG TGGGCGTAAT
CGTCCGGAAG CCACCGTGTT GGCCACGGCC GAGCGGCTCG ACACCAGAAC GGGCGCGGGG
GCGCATCCCG CGACGATGTG GTCGTCTCAG ACGCGAGCGG CGCTACCCGC GGGAGGGAAC
GACGACACCG GTGTGTTCGC CGGGTACCCC CCGAGCCGGT CGCCGGGTGA CTACATGGGC
AACCGCAGTC CGATGACGGC GTTCTCCGGA GGAGGTCGTC GGGTCGGTCC GGTGTCCACG
ACAGACCACG AGTGGGACCG ATACGAGGCC GAGCCGGTGG TGATCCCGTC GCGGCTGTCG
ACGGAGGGTG TGTCGGCGGT GTCGCCTCCG GTGGTGCAGG ACGCGGCCTC GGCGGAATCG
GCCGTACCAC AGCCTCGGCG TGTGGAGCAC GAGCTGGTGG CGGGTAAACC CGTGTTCGTG
CTGTACCGGC CGTCGCGGGG CCTGGAGGTT CGCGACGACA ATCGCGACAC AGACCACGTG
GTCCTCTAG
 
Protein sequence
MVVAVLGLQL TLTAPASAQS GCEAPNPERP GSGMVGAIDP PAGNGEDGSA YLDYSYAGMV 
WHVYDCDSGA LSLGSPESTI DTWAGNQLFN IAKNIVGATN SLHYTVLEGG LLNPIYNAVS
RGAETVYDNI YTQLFGLAAL LLAILLFRNI WRGDLSTVSK RALFALGGVW LAASSMALLR
YYDEIDNAIV QTTTNIQAGF VDEAENRIVR DVLPTDLHNE VVYKNWLRGE FGSPDSPQAE
EYGRDLLDAQ AFTWEEMRNG DDADEELIEE KKASYQAIAN QLGPATGYFT GEDGSRTGVG
FLALIQSLCY ALFQLFAKAA VLLAQILVRL FTLTAPLIGL IAILHHDILR RVGRVVGTVA
FNLLVLSVLA GVQALLLRAI FSAGSALSML TQMVVAGLIT VLLFMVGKPG KRLWQMVEMS
VGMVGAAVPS PRGGLFSRFR RNADKPSPQD EFWKTVAEED AAEGGAATRG TGGVLSGGRN
RPEATVLATA ERLDTRTGAG AHPATMWSSQ TRAALPAGGN DDTGVFAGYP PSRSPGDYMG
NRSPMTAFSG GGRRVGPVST TDHEWDRYEA EPVVIPSRLS TEGVSAVSPP VVQDAASAES
AVPQPRRVEH ELVAGKPVFV LYRPSRGLEV RDDNRDTDHV VL