Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_07290 |
Symbol | |
ID | 8386067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 749782 |
End bp | 751710 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644974824 |
Product | hypothetical protein |
Protein accession | YP_003132625 |
Protein GI | 257054793 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGTGG CGGTGCTGGG GTTGCAGCTG ACGCTCACCG CACCCGCCTC GGCGCAGAGC GGCTGTGAGG CACCGAACCC CGAACGTCCC GGTTCGGGCA TGGTGGGGGC GATCGATCCT CCCGCAGGTA ATGGTGAAGA CGGCAGCGCC TATCTCGATT ACAGCTACGC CGGCATGGTG TGGCACGTCT ACGACTGCGA CAGCGGCGCG CTCAGCCTCG GTTCACCCGA GTCCACCATC GACACGTGGG CGGGCAACCA GCTGTTCAAC ATCGCCAAGA ACATCGTCGG AGCCACCAAC TCCCTGCACT ACACGGTGCT GGAAGGCGGC CTGCTCAACC CCATCTACAA CGCCGTCTCC CGGGGCGCGG AGACGGTGTA CGACAACATC TACACCCAGC TGTTCGGGCT GGCCGCCCTG TTGTTGGCGA TCCTGCTCTT CCGGAACATC TGGCGCGGTG ATCTGTCCAC GGTCAGCAAA CGCGCCCTGT TCGCGCTCGG CGGGGTGTGG TTGGCGGCGT CCTCCATGGC GTTGCTGCGC TACTACGACG AGATCGACAA CGCGATCGTG CAGACCACCA CGAACATCCA GGCCGGTTTC GTGGACGAGG CGGAGAACCG GATTGTCCGT GATGTGCTGC CCACCGATCT GCACAACGAG GTGGTCTACA AGAACTGGTT GCGTGGTGAG TTCGGTTCGC CCGACTCGCC GCAGGCCGAG GAATACGGCA GGGACCTGCT GGACGCCCAG GCGTTCACCT GGGAGGAGAT GCGCAACGGC GACGACGCCG ATGAGGAACT GATCGAGGAG AAGAAGGCCT CGTACCAGGC GATCGCGAAC CAGCTCGGTC CGGCCACCGG TTACTTCACC GGTGAGGACG GCAGCCGTAC GGGCGTGGGT TTCCTCGCGC TCATCCAAAG CCTGTGTTAC GCGTTGTTCC AGCTGTTCGC CAAGGCCGCC GTGCTGTTGG CGCAGATCCT GGTCCGGTTG TTCACGTTGA CGGCACCGTT GATCGGACTC ATCGCGATCC TGCACCACGA CATCCTGCGT CGAGTGGGCA GAGTCGTGGG CACGGTGGCG TTCAACCTGC TCGTGCTGTC GGTGCTCGCG GGTGTGCAGG CGCTGCTGCT GCGGGCGATC TTCTCCGCGG GCAGCGCGCT GTCGATGCTG ACGCAGATGG TCGTCGCCGG ACTGATCACC GTTCTGCTGT TCATGGTGGG CAAGCCGGGT AAGCGGTTGT GGCAGATGGT GGAGATGTCG GTGGGCATGG TGGGGGCCGC CGTGCCGAGC CCCCGCGGGG GACTGTTCTC GCGGTTCCGC CGGAACGCCG ACAAACCCAG TCCGCAGGAC GAGTTCTGGA AGACGGTCGC CGAGGAGGAC GCCGCCGAAG GCGGTGCCGC CACCCGCGGT ACGGGTGGGG TGCTCTCGGG TGGGCGTAAT CGTCCGGAAG CCACCGTGTT GGCCACGGCC GAGCGGCTCG ACACCAGAAC GGGCGCGGGG GCGCATCCCG CGACGATGTG GTCGTCTCAG ACGCGAGCGG CGCTACCCGC GGGAGGGAAC GACGACACCG GTGTGTTCGC CGGGTACCCC CCGAGCCGGT CGCCGGGTGA CTACATGGGC AACCGCAGTC CGATGACGGC GTTCTCCGGA GGAGGTCGTC GGGTCGGTCC GGTGTCCACG ACAGACCACG AGTGGGACCG ATACGAGGCC GAGCCGGTGG TGATCCCGTC GCGGCTGTCG ACGGAGGGTG TGTCGGCGGT GTCGCCTCCG GTGGTGCAGG ACGCGGCCTC GGCGGAATCG GCCGTACCAC AGCCTCGGCG TGTGGAGCAC GAGCTGGTGG CGGGTAAACC CGTGTTCGTG CTGTACCGGC CGTCGCGGGG CCTGGAGGTT CGCGACGACA ATCGCGACAC AGACCACGTG GTCCTCTAG
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Protein sequence | MVVAVLGLQL TLTAPASAQS GCEAPNPERP GSGMVGAIDP PAGNGEDGSA YLDYSYAGMV WHVYDCDSGA LSLGSPESTI DTWAGNQLFN IAKNIVGATN SLHYTVLEGG LLNPIYNAVS RGAETVYDNI YTQLFGLAAL LLAILLFRNI WRGDLSTVSK RALFALGGVW LAASSMALLR YYDEIDNAIV QTTTNIQAGF VDEAENRIVR DVLPTDLHNE VVYKNWLRGE FGSPDSPQAE EYGRDLLDAQ AFTWEEMRNG DDADEELIEE KKASYQAIAN QLGPATGYFT GEDGSRTGVG FLALIQSLCY ALFQLFAKAA VLLAQILVRL FTLTAPLIGL IAILHHDILR RVGRVVGTVA FNLLVLSVLA GVQALLLRAI FSAGSALSML TQMVVAGLIT VLLFMVGKPG KRLWQMVEMS VGMVGAAVPS PRGGLFSRFR RNADKPSPQD EFWKTVAEED AAEGGAATRG TGGVLSGGRN RPEATVLATA ERLDTRTGAG AHPATMWSSQ TRAALPAGGN DDTGVFAGYP PSRSPGDYMG NRSPMTAFSG GGRRVGPVST TDHEWDRYEA EPVVIPSRLS TEGVSAVSPP VVQDAASAES AVPQPRRVEH ELVAGKPVFV LYRPSRGLEV RDDNRDTDHV VL
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