Gene Svir_07150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_07150 
Symbol 
ID8386053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp735253 
End bp736194 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content76% 
IMG OID644974811 
Productsugar kinase, ribokinase 
Protein accessionYP_003132612 
Protein GI257054780 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.218801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACGG TGAGTCCCGA CGTCCTCGTG CTGGGGGAGC CGCTGGTCGA GGTGTCCGCG 
TCGGAGCCGT TCCGCGACGG CGCCACGGTG CGACTGGCGT TCTCCGGGGA CGCACTCAAC
GCCGCCGCCG CGGCCGCCGC GGCCGGGGCC CACACGGCGC TGCTGGCTCG GGTGCCCGAC
GACGAACTCG GCGACGCCCT CGTGGCGCGG GTGACCGAAC TCGGCATCGA TACCGGAGCC
GTGATCCGGG TGCCCGGCCA GCACGGCGTG TATTTCACCC ACAGCGATCC CTCGGGGCGG
CGGCAGTTCG CCTACGCCAG GTCGGGCAGC GCGGGTTCGA CGCTGTGTCC GGACGACGTC
GCCGCGGTCG TGGAGGACGC CGGTGTGGTG CTCGCCGGTG GGATCACCGC CGCGGTGTCC
GAGAGCGCGG CCGCCGCCGT GCTGCATGCC GCCGAACGCG CGCGCCGGTT CGTCTACGAC
CCCAATTTCC GGCCACGCCT GACGAGTGCG GAGAATGCGG TCGCGACGCT GCGGCGAGTT
GCTCCCCTGG CCGAGCTGGT CACCCCGTCG TGGCCCGAGG AGGCGCGGAC GCTGTTGGGG
CTGGCGGCCG ACGCGACCCC GCACGCCGCC GTGGCCGCGG CTCGTGCGCT CGGTGCGGCG
GCCGTCGCGC TGACCCGGGG CTCCGACGGC GTGCTCGTGG GGACGGCGGC CGAGGTCGTG
GCCGTCCCGG CGGCGCCGCC GCCGCGGGTG GTGGACCAGA CCGGAGCGGG AGACGTGTTC
GCCGGCACCG TGGCCGCACG GTTGGCGCTC GGCGACGAGC TGCTCGACGC CGTGCGGCTC
GGTACGGCAG CCGCCTCCCT GTCGGTGCAG GGCCGAGGTG GAACGGGATT CCTGCCCACA
CTGGCGCAGA GCCGGGCGGC GGTGGAGGAG ACGCGGGCAT GA
 
Protein sequence
MSTVSPDVLV LGEPLVEVSA SEPFRDGATV RLAFSGDALN AAAAAAAAGA HTALLARVPD 
DELGDALVAR VTELGIDTGA VIRVPGQHGV YFTHSDPSGR RQFAYARSGS AGSTLCPDDV
AAVVEDAGVV LAGGITAAVS ESAAAAVLHA AERARRFVYD PNFRPRLTSA ENAVATLRRV
APLAELVTPS WPEEARTLLG LAADATPHAA VAAARALGAA AVALTRGSDG VLVGTAAEVV
AVPAAPPPRV VDQTGAGDVF AGTVAARLAL GDELLDAVRL GTAAASLSVQ GRGGTGFLPT
LAQSRAAVEE TRA