Gene Svir_06990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_06990 
Symbol 
ID8386037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand+ 
Start bp713468 
End bp714034 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content66% 
IMG OID644974796 
Producttranscriptional regulator 
Protein accessionYP_003132597 
Protein GI257054765 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.606707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0260883 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG ACGACCAGGG CGGAAAGCGC GACGAGCGGT ACCCGTCCGC GGGTGAACTC 
GACTTCTGGT CGTTCGTCGA GCTCGCGAAT CACCGGCTCG CCACCGAATA CGGTTTTCGG 
CACCAGCTGG CCACCGAGGT GCTGCTGACG CTCAACCGCG CCTCGAACAT CGTCACCTAC 
GACCTGGAAG CGGCCGTGCA TCGACCGCGT GGACTGTCGT GGTCGGGGTT CCGGCTGTTG 
TTCGTCACCT GGTTGGCCGG GCCGCTCGAG CCCAAGAACG CCGCCCTGCT CACCGGGATG 
AGCCGCGCCG CCGTGTCGAA TCTGGCGAAG ACGCTGGTCG CGGACGGCCT GCTGGAGCGG 
ACTCCCGACG AGCGGGACGG GCGGTCGGTG CAGTTGTCGC TCACCGAGCG GGGGCATCGC 
GAGATGGTCG AGGTGTTCCG CCTGCACAAC GAGCGGGAAT ACGAGTGGAC CAACGTGCTC 
ACCGAGACCG AGCAGCGCAT TCTGATCATG CTGCTGAACA AGCTCATCAC CAACCGGAAC 
CAGTTCGACG TGCGGGGACG GAACTGA
 
Protein sequence
MTDDDQGGKR DERYPSAGEL DFWSFVELAN HRLATEYGFR HQLATEVLLT LNRASNIVTY 
DLEAAVHRPR GLSWSGFRLL FVTWLAGPLE PKNAALLTGM SRAAVSNLAK TLVADGLLER 
TPDERDGRSV QLSLTERGHR EMVEVFRLHN EREYEWTNVL TETEQRILIM LLNKLITNRN 
QFDVRGRN