| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_05590 |
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| Symbol | |
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| ID | 8385897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 569449 |
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| End bp | 570957 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644974656 |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003132457 |
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| Protein GI | 257054625 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGAGA CCGTCGTTCC TCGGCGTGGC CGTTCGCTGG CCATCGGTGC CGGCGGTCTT
GCCGTACTGC TGGGGGCCCT CGACACCTAT GTCGTCATCG GCCTCTTCCG GCAGATCATG
GAGGATCTGC AGATCCCGGT GAACCGGCTG GAGCGGCTCA CCCCGATCGT CACCGGATAT
CTTCTCGGCT ACATCGCCGC CATGCCGTTG TTGGGTCAGG CTTCCGACCG TTTCGGCCGT
AAGCGCCTGC TCCAGGTGTG TCTCGGCATG TTCGTAGTCG GTTCGGTGTT GACGGCCACC
GCACCGGATC TTCCGCTCAT CGTCACGGGC CGAGTGGTGC TCGGCGTCGC CGGCGGGGCT
TTGTTGCCGG TCACCATGGC TTTGGCCGCT GATCTTTGGT CACATCAGCG TCGGGCCACC
GTGCTGGGTG CCGTGGGGGC GGCCCAGGAA CTGGGCAGTG TTCTGGGCCC GGTCTACGGC
ATCACGCTCG CAGCCGCGAC CGGTTGGCGT GGGGTGTTCT GGATCAACGT GCCGCTGGCG
TTGCTCGCCA TGGTGGCAGT GCATTTCTCC GTGCCTTCGG AGCAGACACG TCGCACCGCA
TCCGTCGACG TGGTCGGCGG CGGACTGCTC GCCGTCACGC TCGGGCTCCT GGTCATCGGT
CTTTACAACC CGGAACCCGG GGAACAGGTA CTGCCTGACT GGGGTGTTCC CGTACTTGCC
GCGGCCGCGG TCATTTTCAT CGCGTTCGTC TTGCACCAGG TCAAAGCGAC CCATCGGCTG
ATCGATCCCA CGCGGGTGCG GATGAAACCG TTCCTTGCCG CTCTCGGCGT CAGTCTCGCG
GCGGGGGCCG CGCTCATGGT GACTCTCGTC GATGTGGACC TGTTCGCTCA GACTCTGCTC
GGCCTCGACG ACGAGGGCGG CGTGCTGTTG CTGCTGCGTT TCCTCGTCGC GCTGCCTGTG
GGAGCACTGA TCGGCGGCGT GTTGACGTCA CGTTTCGGGG AGCGCTGGCT CGCCGTGGCC
AGCATGGTTC TCGCAGCCGT CGGGTTCTGG CTCATGTCGG CATGGACGGT GGACGTACAG
GCCGATCCGC ACGTGCTCGG CCCCTTCATG CTGCCTCGTT TGGATACCGA TCTCGTCGTG
GTCGGCCTTG GCTTGGGACT GGTGATCGCA CCCCTGTCGT CGGCCGTACT TCGTGTCACG
TCCGCAGAAC AACACGGCGT CGCGTCAGCG GGTGTCGTGG TGGCCAGGAT GACCGGGATG
TTGGTGGGCA TCGCGGCATT GTCGGCGTGG GGATTGCATC GATTTCACAG CATGACCGCC
TCACTCGATG TGCCGCTGCC GATGTTGTAC CCGTCCGACG AAGCGTTCCA ATCCGCGATG
GATGCTTATA CCGCTGCGGT GAAGGAAGCG ATGGTCACCC AGTACACCGA AATCTTCGCG
ATAACTGGGG TCGTGTGCAT CGCCGGCGCA TTGTGCGCAA CATTGATCAC CGCACGATCA
AGCCGATGA
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| Protein sequence | MTETVVPRRG RSLAIGAGGL AVLLGALDTY VVIGLFRQIM EDLQIPVNRL ERLTPIVTGY
LLGYIAAMPL LGQASDRFGR KRLLQVCLGM FVVGSVLTAT APDLPLIVTG RVVLGVAGGA
LLPVTMALAA DLWSHQRRAT VLGAVGAAQE LGSVLGPVYG ITLAAATGWR GVFWINVPLA
LLAMVAVHFS VPSEQTRRTA SVDVVGGGLL AVTLGLLVIG LYNPEPGEQV LPDWGVPVLA
AAAVIFIAFV LHQVKATHRL IDPTRVRMKP FLAALGVSLA AGAALMVTLV DVDLFAQTLL
GLDDEGGVLL LLRFLVALPV GALIGGVLTS RFGERWLAVA SMVLAAVGFW LMSAWTVDVQ
ADPHVLGPFM LPRLDTDLVV VGLGLGLVIA PLSSAVLRVT SAEQHGVASA GVVVARMTGM
LVGIAALSAW GLHRFHSMTA SLDVPLPMLY PSDEAFQSAM DAYTAAVKEA MVTQYTEIFA
ITGVVCIAGA LCATLITARS SR
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