Gene Svir_05080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_05080 
Symbol 
ID8385846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp505725 
End bp506180 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content67% 
IMG OID644974606 
Producthypothetical protein 
Protein accessionYP_003132410 
Protein GI257054578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.730131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCTC CCAAGGCGAT GAAAGTGCTG CTGTGGGTGC TCTTCGTCGA ATCTCTCGTC 
GTCGCCGGTG TCGTCTGGCT GCTCGCGACG GGTCCGATGT GGATTCCCGC CTTGGTCACG
TCGCTCCTGA TGGGGTTGGC CGGTTCGATG CTGGCCTGTC GGGGCGTCAT CACGGTGGAC
GACGTGGCGT TGCGGCTCGC GGTGAGGCCG GTGTTCCGCA AGACGATCCC CCGCGCGGAC
GTGGTCTCCG TCGAGCCGAC CACGGTCGAT CCGTGGAAGG ACTTCTCCGG GTGGGGTTAT
CGGACGCGGG GCAAGAAGCT CGTCGGTTTC CTGTTCCACT CGGGGCCGGC CGTCAGGCTC
ACCGTCCGTT CCGGGCGTAC GTATGTCATC ACGGTCCCGG ACGTCGACCG GTTGGTGGAG
GTCTTGCGGC AGCCGACGAA CGTCGGCGGT GCGTGA
 
Protein sequence
MRPPKAMKVL LWVLFVESLV VAGVVWLLAT GPMWIPALVT SLLMGLAGSM LACRGVITVD 
DVALRLAVRP VFRKTIPRAD VVSVEPTTVD PWKDFSGWGY RTRGKKLVGF LFHSGPAVRL
TVRSGRTYVI TVPDVDRLVE VLRQPTNVGG A