Gene Svir_04550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04550 
Symbol 
ID8385793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp445431 
End bp446267 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content69% 
IMG OID644974553 
Productdienelactone hydrolase-like enzyme 
Protein accessionYP_003132357 
Protein GI257054525 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0809694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCA CGGCGAAGCG GTTACTCGAG CAGCTTTCCC GCCCAGGTCC GTACGATGTT 
CTGCGCGGTG ATCTCGCGCT CGTCGGTCTT CCCGGGGTCG TGTTCACGCC GAGCACCGGG
TTCAACCTCC CCGCTGTCGC GTTCGGGCAC GGTTGGCTGC AACCACCGGG CCGGTATCAC
GGCTTGCTGC GGCATCTGGC CAGTTGGGGC ATCGTCGCCG CCGCGCCCGC CACGCACGGA
GGGCCGTTGC CCTCCCACCG GTTGTTCGCC GCCGATCTGC GTTCCACTCT CGACCTGGTC
ACGACGCTGC GTCTCGGCCC CGACGGCATC AGCGTGGACC CGACGAAACT CGGTCTCGCC
GGGCATTCGA TCGGCGGTGG CGCGGCCATC CTCGCCGCGG CCCCCGGCGA AGGCGCCGGG
GACGACGCGC GACAGGTCAA GGCCGTGGCC ACCGTCGCAG CGACCCAGAC CATGCCACCG
GCCACGACGG CGGCCCGCAA GATCACGGCG GTGGGGCTCC ACCTCGCTGG AGACGACGAC
CTCCTCGCTC CCGCCAAGGG AAACGCGGAA GTGATCACCA AGGAATGGGC GGGGCCCGCG
CAACTGCGGG TGATTCCGAA GATGACCCAC CTCGGCGTCA CCGAGGGAAC CCACTGGAGC
CGGCTGCTGT TGCAGGGCAA ACCCCAGCAC ACCGTGCAAC GCCGAGTACG CGCGCTGTTC
ACGGCGTTCT TCCTCACCAC CCTGGCCGGT GACGACACCT ACCGGGAGCT GCTCGACACC
GACCTCAAGG CCGCCCGCAT CGAATACGAC AACCGGGCGG CCCTGACGAA CGCCTAA
 
Protein sequence
MASTAKRLLE QLSRPGPYDV LRGDLALVGL PGVVFTPSTG FNLPAVAFGH GWLQPPGRYH 
GLLRHLASWG IVAAAPATHG GPLPSHRLFA ADLRSTLDLV TTLRLGPDGI SVDPTKLGLA
GHSIGGGAAI LAAAPGEGAG DDARQVKAVA TVAATQTMPP ATTAARKITA VGLHLAGDDD
LLAPAKGNAE VITKEWAGPA QLRVIPKMTH LGVTEGTHWS RLLLQGKPQH TVQRRVRALF
TAFFLTTLAG DDTYRELLDT DLKAARIEYD NRAALTNA