Gene Svir_04400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04400 
Symbol 
ID8385778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp431637 
End bp431954 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content63% 
IMG OID644974539 
Producthypothetical protein 
Protein accessionYP_003132343 
Protein GI257054511 
COG category[S] Function unknown 
COG ID[COG4842] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.398383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCG GTTTTACCGG AACACCGGAG CAGTTCCAGC AGGCGTACCA GGACGTCGAC 
GCGATCAAGG CGTCCATGGA CCAGAACCTG AACCAGCTGC GTAGCAACAT CGAGGCGACG
CAGGCTGGCT GGCAGGGTGA GGCGGCGAAG GCCTTCCAGA ACGTGATGGC CGCCTTCGAC
GAGAAGACCC GCAAGCTGAA CGAGGCGCTC GGCAACATCG GTGAGCTGTT GCAGCAGTCC
GGTGTCAAGT ACCAGCAGGC GGAAGAGGAG CAGAACGCCG CGATCAGCAG CATCGGTAAC
GCCCTCAACG GCCTCTGA
 
Protein sequence
MAGGFTGTPE QFQQAYQDVD AIKASMDQNL NQLRSNIEAT QAGWQGEAAK AFQNVMAAFD 
EKTRKLNEAL GNIGELLQQS GVKYQQAEEE QNAAISSIGN ALNGL