Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_04400 |
Symbol | |
ID | 8385778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 431637 |
End bp | 431954 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644974539 |
Product | hypothetical protein |
Protein accession | YP_003132343 |
Protein GI | 257054511 |
COG category | [S] Function unknown |
COG ID | [COG4842] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.398383 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGGCG GTTTTACCGG AACACCGGAG CAGTTCCAGC AGGCGTACCA GGACGTCGAC GCGATCAAGG CGTCCATGGA CCAGAACCTG AACCAGCTGC GTAGCAACAT CGAGGCGACG CAGGCTGGCT GGCAGGGTGA GGCGGCGAAG GCCTTCCAGA ACGTGATGGC CGCCTTCGAC GAGAAGACCC GCAAGCTGAA CGAGGCGCTC GGCAACATCG GTGAGCTGTT GCAGCAGTCC GGTGTCAAGT ACCAGCAGGC GGAAGAGGAG CAGAACGCCG CGATCAGCAG CATCGGTAAC GCCCTCAACG GCCTCTGA
|
Protein sequence | MAGGFTGTPE QFQQAYQDVD AIKASMDQNL NQLRSNIEAT QAGWQGEAAK AFQNVMAAFD EKTRKLNEAL GNIGELLQQS GVKYQQAEEE QNAAISSIGN ALNGL
|
| |