10 homologs were found in PanDaTox collection
for query gene Svir_03920 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_03920  hypothetical protein  100 
 
 
195 aa  395  1e-109  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3084  hypothetical protein  43.12 
 
 
217 aa  165  4e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_5164  hypothetical protein  53.45 
 
 
276 aa  119  3e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  0.830633  n/a   
 
 
-
 
NC_013159  Svir_21050  hypothetical protein  31.71 
 
 
171 aa  65.1  0.0000000006  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0401798  normal  0.348603 
 
 
-
 
NC_013093  Amir_2641  hypothetical protein  28.73 
 
 
184 aa  63.2  0.000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.959091  n/a   
 
 
-
 
NC_013093  Amir_5552  hypothetical protein  32.26 
 
 
120 aa  52.8  0.000004  Actinosynnema mirum DSM 43827  Bacteria  normal  0.630882  n/a   
 
 
-
 
NC_013947  Snas_5661  hypothetical protein  25.23 
 
 
138 aa  46.6  0.0002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.164864 
 
 
-
 
NC_013947  Snas_2684  hypothetical protein  26.26 
 
 
131 aa  45.4  0.0005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0445875 
 
 
-
 
NC_009380  Strop_0481  hypothetical protein  28.72 
 
 
145 aa  42  0.006  Salinispora tropica CNB-440  Bacteria  normal  0.571872  normal  0.104037 
 
 
-
 
NC_012669  Bcav_1047  hypothetical protein  27.71 
 
 
124 aa  41.6  0.007  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.228121 
 
 
-
 
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