Gene Svir_03920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03920 
Symbol 
ID8385730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp392515 
End bp393102 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content65% 
IMG OID644974492 
Producthypothetical protein 
Protein accessionYP_003132296 
Protein GI257054464 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGCGG AGTTCGAGCG GCTCCTCGCG CAGTTCGAGC GGTTCCAGTC GAAGATCAAG 
AAAGTCGATG ACCAGCTCGC GAACGTCGAG CGGATGCAAA GCGAGATAGC GGAGCTCGAG
GCCACCGCAT CGAACGCCGA TCGCAGCATC ACCATCGTGG CCGGACCGGG TGGCGCCATC
AAGGACATCC AGCTGACGGA CAAGGCCCTC TCCCAGCAGC CGCAGGCACT GTCCGCCGCA
CTCATGTCGA CCATCCAGGA AGCGGTGGCC GAAGCGGCGC GCAAGCAGGC CGCGATCGTC
GACGACCACA TGGGGGGCCA ACTGAACGTC ACCGATCAGG TGCTGGAGAC CCAAGCCCAG
CTGTTCGGCA CCTCTCCCCA AGAGCTTCGG GAGCGGATGG AGCAGGAGCG GCCCATCCGA
CAGACGCCCC TCCGCCCGGA AGAGGAATAT CACGAGGACT ACTCCCACCA GGACTTCCTG
GGGAGCGATC AGGAGCAGCA GAGCCCCCCA CCACCTCCGG CACCGTCGGG CGGCTCGGCC
GGCGACGAGT TCCTGCAGAA CCTCTTCAAC AACGACGACC ATCGATGA
 
Protein sequence
MSAEFERLLA QFERFQSKIK KVDDQLANVE RMQSEIAELE ATASNADRSI TIVAGPGGAI 
KDIQLTDKAL SQQPQALSAA LMSTIQEAVA EAARKQAAIV DDHMGGQLNV TDQVLETQAQ
LFGTSPQELR ERMEQERPIR QTPLRPEEEY HEDYSHQDFL GSDQEQQSPP PPPAPSGGSA
GDEFLQNLFN NDDHR