Gene Svir_03850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03850 
Symbol 
ID8385723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp386586 
End bp387734 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content62% 
IMG OID644974485 
Producthypothetical protein 
Protein accessionYP_003132289 
Protein GI257054457 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.756618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGG TCAGTGACAT CGCAGGTTCC ATCGAGCTGA ACGCCGACAA CGAGGATTCC 
TTCCTGGACA AGGCGAAGAG CCTTGCTGAA CAGGTCCCCG GTGCCAAGCA GGCGATCAAG
GGTTACGACA CCGTCACCAA CATCTGGCAA GGAATGCCGG AGGACCCCGA CGCCGCCGAC
ATCATGTTGC ACGCCGGTGG TGTGATCACC GACGCCGCCA GTTTCACCGC CGAGTGTGCC
ATGGAAGCAG GCATGGCGGT GCTCGACCCT GTGGGTTGGC TGGTGGACAA CGGCATCAGC
ATCGTGCTCC ATCTCGTCAC GCCACTGCAG GACCTTTTGC ACATGGTGTC CGGAGACGGT
CCGGCTTTGA GTGACGCTTC CGACGACTTC GCGGCGATCG GCAACGGGCT CGTCGAGTAC
GCGGGTGAGT TCGTGCGTGT GGCCGACGAG ACGCTCGCCG ATTGGGAAGG CGCGGCCAGT
GACGCCGCCC GCAACGCTCT CGCGGACTTC GCCAAAGGCA TCGAGGGGGT GGCCACGAGT
GCGGGTGGCG TCGCCCAGAT CCTGAAGATG TCGTCGATGA TCATGACGGT CGTCGAGGAG
GTCATCAAGG CGATCATCAC CGAGTTCGTC ACGTGGCTGA TCTGGATCTG GGTGCCCGCG
CTGGCAAGCT CGGTGGTGAG TTTCGGTTCC TCAGTCGCCG CGGCGATGTC GGCTTCGGTC
GCGAAGGCGG CAAGCACGTT CTCACGTGTC ACCAGCAAGA TGGGAAAGCT GGGCAAGCTG
CTGGAAAAGA TCCTGGAGTT CTTCAAGAAG TTCGGCTCGA AGATGGTCAA GCTCGGCGAG
AAGCTCGGAG TCGAACCGAA GAACTACGGA GACAACGTGA AGGAGGTCGT GGAGCAGGTC
GGCCGAAGCG GCGCGATGAA GACCGCGGTG ACCGAGTCGC TGAAGAAGGG CGGCGGAGCG
GTCTTCAACT CCACCATCGG TATCGATCCG ACGAGCACGG TCGACACCGC GGGCGAGGCA
GGCAAAACCG TCCTCGACCA TTACGGCAAG CTCGTGGACC AGACCACGGA CCTGAAGGAC
ATCGGCGACA AGGGCGACAT CGGCTCGGGC ACCGACGTGG AAGAAACCCG CGACCTGCTC
GACATGTGA
 
Protein sequence
MTEVSDIAGS IELNADNEDS FLDKAKSLAE QVPGAKQAIK GYDTVTNIWQ GMPEDPDAAD 
IMLHAGGVIT DAASFTAECA MEAGMAVLDP VGWLVDNGIS IVLHLVTPLQ DLLHMVSGDG
PALSDASDDF AAIGNGLVEY AGEFVRVADE TLADWEGAAS DAARNALADF AKGIEGVATS
AGGVAQILKM SSMIMTVVEE VIKAIITEFV TWLIWIWVPA LASSVVSFGS SVAAAMSASV
AKAASTFSRV TSKMGKLGKL LEKILEFFKK FGSKMVKLGE KLGVEPKNYG DNVKEVVEQV
GRSGAMKTAV TESLKKGGGA VFNSTIGIDP TSTVDTAGEA GKTVLDHYGK LVDQTTDLKD
IGDKGDIGSG TDVEETRDLL DM