| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_03700 |
|---|
| Symbol | |
|---|
| ID | 8385708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 365313 |
|---|
| End bp | 366065 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644974470 |
|---|
| Product | ABC-type transport system involved in resistance to organic solvents, permease component |
|---|
| Protein accession | YP_003132274 |
|---|
| Protein GI | 257054442 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
|---|
| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.270229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGGG AGACCGGGAA GCTGTTCGCG CTCGCCCTCG ATGTGGCACG CGGCGTGTTT
CGACGGCCGT TTCAGTTTCG GGAATTCATC CAACAGGCGT GGTTCATCGC CAGTGTGACG
ATCCTGCCGA CCGCGCTGGT GGCCATCCCG TTCGGCGCGG TCATCTCGAT GCAGTTCGGT
TCGCTGGCCA AACAGCTCGG AGCGCAGTCG TACACGGGCG CGGGCAGTGT GCTGGCGACC
GTGCAGCAGG CGAGCCCGCT CGTGGTGGCG TTGCTCGTCG CGGGTGCGGG TGGGTCGGCG
ATCTGCGCCG ACATCGGTGC GCGCACGATC CGCGAGGAGA TCGACGCCAT GGAGGTGCTC
GGGGTCTCAG CGGTGCAGCG GCTCGTGGTG CCGAGAGTGC TGGCGTGCAT GTTCGTCGCG
CTTTTGCTCA ACGGCATGGT CAGCGTCATC GGCGTGCTCG GCGGCTACTT CTTCAACGTC
GTGTTGCAGG ACGGCACACC GGGCGCGTAC CTGGCGAGCT TCTCGGCGCT GGCGCAGCTG
TCCGACCTGT GGATCGGTGA GATCAAGGCA TTGATCTTCG GGTTCATCGC AGCTGTCGTC
GCCGCGTACC GGGGACTGAA CCCGCCACCC GGTCCCAAGG GAGTGGGCGA TGCGGTGAAC
CAGTCCGTCG TCATCACGTT CCTTTTGCTG TTCGTGGTCA ACACCGTGCT CACGTTGATC
TACCTGCAGC TCGTTCCTTC GAAGCTGGAC TGA
|
|---|
| Protein sequence | MLRETGKLFA LALDVARGVF RRPFQFREFI QQAWFIASVT ILPTALVAIP FGAVISMQFG
SLAKQLGAQS YTGAGSVLAT VQQASPLVVA LLVAGAGGSA ICADIGARTI REEIDAMEVL
GVSAVQRLVV PRVLACMFVA LLLNGMVSVI GVLGGYFFNV VLQDGTPGAY LASFSALAQL
SDLWIGEIKA LIFGFIAAVV AAYRGLNPPP GPKGVGDAVN QSVVITFLLL FVVNTVLTLI
YLQLVPSKLD
|
|---|
| |