| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_03650 |
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| Symbol | rplA |
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| ID | 8385703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 360828 |
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| End bp | 361547 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974465 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_003132269 |
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| Protein GI | 257054437 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.57947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGC GCAGCAAGGC CTATCGTCAG GCCGCCGAGC TGATCGACCG CGAGCGGCTG
TACACGCCGC TGGAGGCGGC GAGGCTCGCC AAGGAAACTT CGAAGGTCAA GATGGATGCC
ACGGTCGAGG TCGCCATGCG GCTCGGCGTG GATCCCCGTA AGGCCGACCA GATGGTCCGC
GGCACCGTGA ACCTGCCGCA CGGAACGGGT AAGACCGTCC GCGTCATCGT CTTCGCGACC
GGGGAGAAGG CCGCAGAGGC CGAGGCCGCC GGTGCTGACG CGGTCGGGTC CGACGAGCTG
ATCGAGCGCA TCCAGGGTGG CTGGCTCGAG TTCGACGCCG CGATCGCGAC CCCGGACCAG
ATGGCGAAGG TGGGCCGCGT GGCCCGCATC CTCGGCCCGC GTGGCCTGAT GCCGAACCCG
AAGTCGGGCA CCGTGACCCA GGACATCGGC AAGGCCGTGT CCGACATCAA GGGCGGCAAG
ATCAGCTTCC GGATCGACAA GCAGGCCAAC CTGCACCTGG TGATCGGCAA GGTGTCCTTC
GACGCCGAGA AGCTGGTGGA GAACTACGCC GCGGCGCTGG ACGAGGTGTT GCGTGCCAAG
CCGGCCGCGT CGAAGGGCCG TTACCTGAAG AAGGTCACCT TCTCCACCAC CATGGGTCCG
GGTATCCCGG TCGACCCGTC TCGCACCCGC GACCTGCTGG CGGAGGAGGT CAACGCCTGA
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| Protein sequence | MAKRSKAYRQ AAELIDRERL YTPLEAARLA KETSKVKMDA TVEVAMRLGV DPRKADQMVR
GTVNLPHGTG KTVRVIVFAT GEKAAEAEAA GADAVGSDEL IERIQGGWLE FDAAIATPDQ
MAKVGRVARI LGPRGLMPNP KSGTVTQDIG KAVSDIKGGK ISFRIDKQAN LHLVIGKVSF
DAEKLVENYA AALDEVLRAK PAASKGRYLK KVTFSTTMGP GIPVDPSRTR DLLAEEVNA
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