Gene Svir_03580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03580 
Symbol 
ID8385696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp355740 
End bp356723 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content70% 
IMG OID644974458 
Producthypothetical protein 
Protein accessionYP_003132263 
Protein GI257054431 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.393367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGAAGA ACAAGCTGCG CATACTGCTG GCCACACTGG GCGTTCCGGC CGTGGTCTTC 
ACCGTGGCCC TCCTGCTCCG TGACGCCTGG GCGGCGCGTC TACCGACGGA AGTGGCCAGC
CACTGGGGAA CAGGCGGGGT CGACGACGGC ATCGCTCTCG ACACCTTGGC GACGTGGACA
CTGAGCGCCG GCGCGGTCCT CGCCGTGGCC AGCACCGTGC TCTTGCTGAT GCTACTGCGT
CGTGGATACG GCACACACCG CCCGTACGTC CTGGTCAGCA CGCTTTTGAC GATGCTGCCG
ATGGCCGCGC TGATCTCGTC CATGGCGGTG ACGCTCGACG CCGCCTCCTG GCGGGAGGCC
GGTGGCGCGG GTGCCGCGCT CGCGGTGCTC GCGGCGGTGC TCGTACCGGC GACGACCGTG
GCAGTGCTCA TCGCACCGTC CGTACCGCCC ACGACCGGGG TACCGGACAC CCCTGGCGAT
GCCACCGTGG GATTGGCAGC CGGTCAACGC GCGACGTGGA ACGGTGCGGC CACCAACGTC
GCTCTGGCCT CCGGCTGCGT GCTCGCGCCA CTTCTCGCCT TGTTCCTCGT CGACCTGCTG
ACGGAGAACT CGCTGTCGTG GAGCGGATAC GCCGTTCCCA TCGCGGTCGG CGTACTCGCC
ATGCTCGGAG TGTCCCGTGT GCGGGTGATC GTGGACTCCA CCGGCGTCAC GATCCGGATG
GGCGTGCTGG GGTTCCCGAC CAAGCACATC CCCCTGTCCG ACATCGCCTC GGCCGCCGCG
ACGACGACCA CCCTGTTCAG GGGCGGCGGG CTCGGCATCC GCACCACCCC CACCGGCGAC
ACCCTCTTCA AGGTCCGCGG CGGCCCGACG TTGGAACTCG TGCTCACGTC CGGTCGTCGG
GTCCTCGCCA ACGTCGACCA TCCCGACCAG GCGGCGGGAC TGGTGAACGA CCTCCTCCGA
GAAGCCCTGC GGCAGCACGA CTGA
 
Protein sequence
MRKNKLRILL ATLGVPAVVF TVALLLRDAW AARLPTEVAS HWGTGGVDDG IALDTLATWT 
LSAGAVLAVA STVLLLMLLR RGYGTHRPYV LVSTLLTMLP MAALISSMAV TLDAASWREA
GGAGAALAVL AAVLVPATTV AVLIAPSVPP TTGVPDTPGD ATVGLAAGQR ATWNGAATNV
ALASGCVLAP LLALFLVDLL TENSLSWSGY AVPIAVGVLA MLGVSRVRVI VDSTGVTIRM
GVLGFPTKHI PLSDIASAAA TTTTLFRGGG LGIRTTPTGD TLFKVRGGPT LELVLTSGRR
VLANVDHPDQ AAGLVNDLLR EALRQHD