Gene Svir_03560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03560 
Symbol 
ID8385694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp354397 
End bp354798 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content65% 
IMG OID644974456 
Productacyl dehydratase 
Protein accessionYP_003132261 
Protein GI257054429 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.210712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGTCG GAGACCAGTT GCCACCGTTG TCCGTGCGCA TCACCCGGGC TCAGCTGGTG 
CGCTACGCGG GTGCCTCACT CGACTTCAAT CCCATTCACT GGAATGAACG CTTCGCCACC
GAGGTGGGGC TGCCCGGGGT GATCGCCCAC GGCATGTTGA CCATGGCCCT GGGCGGACGT
CTGGTGACGG ACTGGTTGGG TGATCCCGGT CGGCTGATCG ACTACAGCGC CCGGTTCACC
CGGCCCGTGG TCGTGCCTGA CGACGACACC GGTGCGCTCG TGGAGTTCAC CGGCAAAGTG
GGTGAGTTGC GAGACGACGG TACGGCGCGT ATCGACATCA CGGCCAAGTT CGAGGGCAAG
TCGGTTCTGG GCAAGGCCCA GGCCGTGGTG CGTCTGCCCT GA
 
Protein sequence
MNVGDQLPPL SVRITRAQLV RYAGASLDFN PIHWNERFAT EVGLPGVIAH GMLTMALGGR 
LVTDWLGDPG RLIDYSARFT RPVVVPDDDT GALVEFTGKV GELRDDGTAR IDITAKFEGK
SVLGKAQAVV RLP