Gene Svir_03250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03250 
Symbol 
ID8385663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp321873 
End bp322787 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content69% 
IMG OID644974425 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_003132233 
Protein GI257054401 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA TGACGACCGG GATGACGGCA GTGGACACGC TGGTGCTCGC GCAGGCCGAC 
GCCGCGGCCA CCGTGTCCAC CGGCGAGGCG ATCGCGTTCT GGATCCTCGG GCCGTTGGCC
CTGGCCGGTG CACTGGGCAT GGTGTTCGCC CGCAACGCGG TGCACTCGGC GTTGTGGTTG
GTGCTGACGA TGCTCTCGCT CGGGATGCTG TACCTGGCGC AGCAGGCACA GTTCCTCGGC
TTCACCCAGA TCATCGTCTA CACCGGCGCG ATCATGATGC TGTTCCTGTT CGTGCTGATG
TTGGTGGGCC GGGAATCGTC CGATTCGGTG GTCGAGGTGC TGCGCGGCCA ACGTCTGATG
GCGGGTCTCG TCGGGGTGGG TGTCGCCGGA CTGTTGGCGG CCGCCCTCAC CCGGGCGATC
GCCGACGTCA CCCCGGCGCC CCTGCTCGAT CCGTGGAGCG CTGACGGCGG CGGTGCCGGT
GGGCTCGGTC GGCTCATCTT CACCGACTAC CTGTTCCCGT TCGAACTGAC CGCCGCGTTG
CTGATCACGG CGGCGATGGC GGGGATGGTG CTGTCGTTCA CCTCGCGTCA CGTCAAGGGG
GGCAAGCGCA GCCAGCGGGA GCTCGTCATC GCGCGGTTCC GTGGCGAGTA CGAGCGGCCG
TCGCCGAAGC CGGGCCCCGG TGTGTTCGCC ACCTCCAATT CGGTGGCCAC GCCCGCTCTG
CTGCCCGACG GTTCGGTGGC GCCCGAGTCG CTGTCCGACC TGATCGAGTC CACACCGACC
GCCCAACTGC ACACCCAGCG CAAGCAGGTG AACGGCGGCG CCTCGAAACA GGGGCCGAGG
GCGCTTGTCG GGTCTGACGG CGCGAGCCTG GACGGCACGG TCGGCGCTCG TTCCAACGAG
GGGGAGGATT CGTGA
 
Protein sequence
MTAMTTGMTA VDTLVLAQAD AAATVSTGEA IAFWILGPLA LAGALGMVFA RNAVHSALWL 
VLTMLSLGML YLAQQAQFLG FTQIIVYTGA IMMLFLFVLM LVGRESSDSV VEVLRGQRLM
AGLVGVGVAG LLAAALTRAI ADVTPAPLLD PWSADGGGAG GLGRLIFTDY LFPFELTAAL
LITAAMAGMV LSFTSRHVKG GKRSQRELVI ARFRGEYERP SPKPGPGVFA TSNSVATPAL
LPDGSVAPES LSDLIESTPT AQLHTQRKQV NGGASKQGPR ALVGSDGASL DGTVGARSNE
GEDS